BLASTX nr result

ID: Atractylodes21_contig00052114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052114
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]   105   4e-21
ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat...   105   5e-21
ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   101   7e-20
ref|NP_177580.1| pentatricopeptide repeat-containing protein [Ar...    96   3e-18
ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arab...    90   2e-16

>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
 Frame = +3

Query: 3    NVVLWRTLLGACSICGD--------IDLAEEARGRLVESQGNLAGDDVIMGNIYASSGIW 158
            N V+WRTLLGACS+ GD        I +  EAR +L+E + +  GD+VIM N+YA+ G+W
Sbjct: 933  NAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARRQLLELEPSHVGDNVIMSNLYAAKGMW 992

Query: 159  DKKEITRDRINQRRVPGCSSIEVGSEVSEFVAAD 260
            DKK + R++I QRR PGCSSIEVG ++ EFVAAD
Sbjct: 993  DKKMLVRNQIKQRRDPGCSSIEVGIDIKEFVAAD 1026


>ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74400-like [Vitis vinifera]
          Length = 482

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
 Frame = +3

Query: 3   NVVLWRTLLGACSICGD--------IDLAEEARGRLVESQGNLAGDDVIMGNIYASSGIW 158
           N V+WRTLLGACS+ GD        I +  EAR +L+E + +  GD+VIM N+YA+ G+W
Sbjct: 355 NAVVWRTLLGACSLQGDSNGNGNSNIKIYSEARRQLLELEPSHVGDNVIMSNLYAAKGMW 414

Query: 159 DKKEITRDRINQRRVPGCSSIEVGSEVSEFVAAD 260
           DKK + R++I QRR PGCSSIEVG ++ EFVAAD
Sbjct: 415 DKKMLVRNQIKQRRDPGCSSIEVGIDIKEFVAAD 448


>ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74400-like [Glycine max]
          Length = 333

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/86 (54%), Positives = 63/86 (73%)
 Frame = +3

Query: 3   NVVLWRTLLGACSICGDIDLAEEARGRLVESQGNLAGDDVIMGNIYASSGIWDKKEITRD 182
           N V+WRTLLGACS+ G+++LA E R +L++       D V M NIYA+ G+W+KK + ++
Sbjct: 239 NAVVWRTLLGACSVRGELELAAEVRQKLLKLDLGYVVDSVAMSNIYANKGMWNKKIVVKN 298

Query: 183 RINQRRVPGCSSIEVGSEVSEFVAAD 260
           +I Q R PGCSSIEVGS VSEFV +D
Sbjct: 299 QIKQSRAPGCSSIEVGSGVSEFVVSD 324


>ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g74400 gi|12324820|gb|AAG52382.1|AC011765_34
           hypothetical protein; 20273-21661 [Arabidopsis thaliana]
           gi|332197466|gb|AEE35587.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/84 (52%), Positives = 62/84 (73%)
 Frame = +3

Query: 3   NVVLWRTLLGACSICGDIDLAEEARGRLVESQGNLAGDDVIMGNIYASSGIWDKKEITRD 182
           N V+WRTLLGACS+ G+++L EE + R+ E   +  GD V + NIYAS G+WD+K   RD
Sbjct: 343 NTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRD 402

Query: 183 RINQRRVPGCSSIEVGSEVSEFVA 254
           R+ +RR+PG S IE+GS ++EFV+
Sbjct: 403 RVRKRRMPGKSWIELGSIINEFVS 426


>ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
           lyrata] gi|297333380|gb|EFH63798.1| hypothetical protein
           ARALYDRAFT_339633 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/84 (50%), Positives = 61/84 (72%)
 Frame = +3

Query: 3   NVVLWRTLLGACSICGDIDLAEEARGRLVESQGNLAGDDVIMGNIYASSGIWDKKEITRD 182
           N V+WRTLLGAC + G+++L EE + R+ + + +  GD V + NIYAS G+WD+K   RD
Sbjct: 343 NAVIWRTLLGACILHGNVELGEEVQKRIFKLERDHVGDYVALSNIYASKGMWDEKWKMRD 402

Query: 183 RINQRRVPGCSSIEVGSEVSEFVA 254
           R+ +RRVPG S IE+ S ++EFV+
Sbjct: 403 RVRKRRVPGKSWIELRSIITEFVS 426


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