BLASTX nr result

ID: Atractylodes21_contig00052097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052097
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87633.2| Putative polyprotein, related [Medicago truncatula]     82   6e-14
gb|ABW81021.1| transposase [Arabidopsis lyrata subsp. lyrata]          58   9e-07
emb|CAN63713.1| hypothetical protein VITISV_008235 [Vitis vinifera]    55   4e-06

>gb|ABE87633.2| Putative polyprotein, related [Medicago truncatula]
          Length = 121

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   KLVKFEGVDF-RW*QKKMHFLLTTLKVVYVLSTPMPELLVEETLVNIRERNKWENDDYIC 179
           KL KF+G +F RW QKKM FLLTTLKV YVL+   PE   +ET+   R+R KW+NDDYIC
Sbjct: 14  KLEKFDGGNFIRW-QKKMKFLLTTLKVAYVLNMARPEEKDDETVAETRDRQKWDNDDYIC 72

Query: 180 CGHILNG 200
             HILNG
Sbjct: 73  LRHILNG 79


>gb|ABW81021.1| transposase [Arabidopsis lyrata subsp. lyrata]
          Length = 116

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   KLVKFEGVDFRW*QKKMHFLLTTLKVVYVLSTPMP 107
           KL KFEGVDFR  QKKMHFLLTTL VV+VLS PMP
Sbjct: 15  KLDKFEGVDFRRWQKKMHFLLTTLNVVHVLSMPMP 49


>emb|CAN63713.1| hypothetical protein VITISV_008235 [Vitis vinifera]
          Length = 387

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +3

Query: 3   KLVKFEGVDFRW*QKKMHFLLTTLKVVYVLS---TPMPELLVEETLVNIRERNKWENDDY 173
           +L +F G +F   Q K+ FLLTTLK+ Y+L     P+PE    +T   +  R K E D+ 
Sbjct: 15  RLDRFNGSNFTRWQDKVRFLLTTLKIFYILDPTLAPLPEPKENDTPQVVATRKKMEEDEL 74

Query: 174 ICCGHILN 197
           IC GHILN
Sbjct: 75  ICRGHILN 82


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