BLASTX nr result

ID: Atractylodes21_contig00052084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052084
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    63   3e-08
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    59   5e-07
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    59   5e-07
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    56   3e-06

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/60 (46%), Positives = 42/60 (70%)
 Frame = -1

Query: 183 DQFIKNDHFEASLFSVPKVKLPLFEGVDPRGWITKAELYFQVHQTPSSQKIKLTQMCMEG 4
           ++++++   E+ L    KVKLPLFEG DP  WIT+AE+YF V  TP   ++KL+++ MEG
Sbjct: 730 EEYVESSQNESRLAG-KKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEG 788


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = -1

Query: 204 KPLNPNMDQFIKNDHFEASLFSVPKVKLPLFEGVDPRGWITKAELYFQVHQTPSSQKIKL 25
           K +N   +  +     E S  S  KVKLPLFEG D   WIT+ E+YF V  T    ++KL
Sbjct: 32  KGVNQESENSVGESSQEESRLSGKKVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKL 91

Query: 24  TQMCMEGS 1
            ++ MEGS
Sbjct: 92  ARLSMEGS 99


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = -1

Query: 132 KVKLPLFEGVDPRGWITKAELYFQVHQTPSSQKIKLTQMCMEGS 1
           KVKLPLF+G DP  WIT+AE+YF V  T    ++KL ++ MEGS
Sbjct: 73  KVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGS 116


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/64 (39%), Positives = 37/64 (57%)
 Frame = -1

Query: 195 NPNMDQFIKNDHFEASLFSVPKVKLPLFEGVDPRGWITKAELYFQVHQTPSSQKIKLTQM 16
           N   +  + ++  +    SV KV+L +F G DP GWI +AE+YF V  T    K+ L Q+
Sbjct: 62  NKKKNSELHDEALDEFRLSVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQL 121

Query: 15  CMEG 4
           CM+G
Sbjct: 122 CMDG 125


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