BLASTX nr result

ID: Atractylodes21_contig00052063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052063
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316034.1| GRAS family transcription factor [Populus tr...   149   3e-34
ref|XP_002316033.1| GRAS family transcription factor [Populus tr...   149   3e-34
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun...   147   7e-34
ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun...   139   2e-31
ref|XP_002329212.1| GRAS family transcription factor [Populus tr...   138   4e-31

>ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222865074|gb|EEF02205.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 588

 Score =  149 bits (375), Expect = 3e-34
 Identities = 77/153 (50%), Positives = 101/153 (66%)
 Frame = +1

Query: 4   NPTTLSIYQKLPFYQAGQFSGVQALVDGVAGATKVHIIDLSIKNGVHNTILMQALASQDN 183
           NP  L+ YQ +PF Q   F+G+QA+V+ V  A ++HIIDL I+NGV  T+LMQAL SQ  
Sbjct: 288 NPAILACYQNVPFSQVAHFAGIQAIVEKVNRAKRIHIIDLEIRNGVQWTVLMQALVSQHE 347

Query: 184 CPVEHLKITAVGSNFKEKMEQTGDRLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXXX 363
            P+E LKI+A+GS  KE +E TG RL  FAE++N+ FSF VVMV DMLD K         
Sbjct: 348 SPLELLKISAIGSTSKELIEDTGKRLMSFAETMNIPFSFKVVMVSDMLDLKKDLFELGAE 407

Query: 364 XXXXVYSSYGLWTMIAQQDRLESLMKVIKNANP 462
               VY+   L ++IA  +RL+S+MKV +N NP
Sbjct: 408 EAVAVYAENSLRSLIALPNRLDSIMKVFRNINP 440


>ref|XP_002316033.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222865073|gb|EEF02204.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 561

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/154 (46%), Positives = 103/154 (66%)
 Frame = +1

Query: 1   PNPTTLSIYQKLPFYQAGQFSGVQALVDGVAGATKVHIIDLSIKNGVHNTILMQALASQD 180
           PNP   + Y+ +PFYQ   F+G QA+++ +A A ++H+IDL I NG+  T+LM ALAS++
Sbjct: 263 PNPIIQACYEGIPFYQVPHFAGTQAILENMAEAKRIHVIDLKISNGLQWTVLMHALASRN 322

Query: 181 NCPVEHLKITAVGSNFKEKMEQTGDRLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXX 360
            CP+E LKITAVG+N K+ +E TG+RLK FA++ N+ FSF +VMV  MLD K        
Sbjct: 323 ECPLELLKITAVGTNSKQHIEDTGNRLKSFAQTTNIPFSFKIVMVSSMLDLKEDLFELDA 382

Query: 361 XXXXXVYSSYGLWTMIAQQDRLESLMKVIKNANP 462
                VYS Y L ++I Q ++L  LM+V ++ NP
Sbjct: 383 DEQLAVYSEYALKSLIVQPNQLGHLMEVFRSINP 416


>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 594

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/154 (46%), Positives = 106/154 (68%)
 Frame = +1

Query: 1   PNPTTLSIYQKLPFYQAGQFSGVQALVDGVAGATKVHIIDLSIKNGVHNTILMQALASQD 180
           PNPT L+ + + PF Q   F+G+QA+VD VA A K+HI+DLS++ G+  T+LMQAL S+ 
Sbjct: 290 PNPTILASHLETPFCQVAHFAGIQAIVDNVADAKKIHILDLSLRYGMQWTVLMQALVSRC 349

Query: 181 NCPVEHLKITAVGSNFKEKMEQTGDRLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXX 360
           +CP+EHLKITA+G+  +E +E TG RL  FAE++N++FSF + +V D+LD K        
Sbjct: 350 DCPLEHLKITAIGTTSRELIENTGKRLISFAETMNIAFSFKMALVSDLLDLKEDLLDLDD 409

Query: 361 XXXXXVYSSYGLWTMIAQQDRLESLMKVIKNANP 462
                +Y +Y    +I+  +RL+S+M++IKN NP
Sbjct: 410 GETVAIYFAYLPRNLISLPNRLDSMMRMIKNVNP 443


>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 562

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/153 (45%), Positives = 99/153 (64%)
 Frame = +1

Query: 4   NPTTLSIYQKLPFYQAGQFSGVQALVDGVAGATKVHIIDLSIKNGVHNTILMQALASQDN 183
           N  +L+ +QK+PF Q  +F+ +Q +V+ VA A ++HIIDL I++G    +LMQAL S+ +
Sbjct: 269 NAASLACHQKIPFIQVARFTAIQEIVENVARAKRIHIIDLEIRSGAQWPVLMQALMSRHH 328

Query: 184 CPVEHLKITAVGSNFKEKMEQTGDRLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXXX 363
           CP+E LKI+A+G+  K  +E TG RL  FAES+N+ FSF  VMV DMLD K         
Sbjct: 329 CPLELLKISAIGTTSKHLIEDTGKRLASFAESMNVPFSFRAVMVSDMLDLKKELFELDSE 388

Query: 364 XXXXVYSSYGLWTMIAQQDRLESLMKVIKNANP 462
               VYS Y L  ++   +RLES+M +++N NP
Sbjct: 389 EAVAVYSEYFLMNLLVAPNRLESIMGMLRNINP 421


>ref|XP_002329212.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222870993|gb|EEF08124.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 594

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/154 (48%), Positives = 99/154 (64%)
 Frame = +1

Query: 1   PNPTTLSIYQKLPFYQAGQFSGVQALVDGVAGATKVHIIDLSIKNGVHNTILMQALASQD 180
           PNPT L   + +PF Q   F+G+QA+V+ VA A ++HIIDL I+NG    ILMQAL    
Sbjct: 305 PNPTILECQRVMPFCQISHFAGIQAIVENVAEAKRIHIIDLVIRNGAQWAILMQAL---- 360

Query: 181 NCPVEHLKITAVGSNFKEKMEQTGDRLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXX 360
            CP+E LKITA+G+  K  +E TG  LK FA+++N+ FSF +VMV D+LD K        
Sbjct: 361 -CPLELLKITAIGTTSKHLIEDTGRWLKSFAQNMNIPFSFKIVMVSDLLDLKENLLEIDV 419

Query: 361 XXXXXVYSSYGLWTMIAQQDRLESLMKVIKNANP 462
                VYSSY    +IA  +RL+S+MK+I+N NP
Sbjct: 420 EEKIAVYSSYLPRKLIAMPNRLDSMMKMIRNINP 453


Top