BLASTX nr result

ID: Atractylodes21_contig00052050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052050
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524178.1| sgp1 monomeric G-protein, putative [Ricinus ...    67   2e-09
ref|NP_850621.1| Ras-related small GTP-binding family protein [A...    63   2e-08
ref|NP_850622.1| Ras-related small GTP-binding family protein [A...    63   2e-08
ref|NP_566690.1| Ras-related small GTP-binding family protein [A...    63   2e-08
ref|XP_002523001.1| sgp1 monomeric G-protein, putative [Ricinus ...    62   4e-08

>ref|XP_002524178.1| sgp1 monomeric G-protein, putative [Ricinus communis]
           gi|223536547|gb|EEF38193.1| sgp1 monomeric G-protein,
           putative [Ricinus communis]
          Length = 196

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/103 (41%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = -3

Query: 384 RVAILRRCAGSLWDQVLACWIGKPICYR----QILESGPTATVCHRFPSGEMGPSCADGY 217
           R +ILRRC    W+Q+L C +GKPI Y     ++    P AT+     S    P+     
Sbjct: 13  RFSILRRCILRAWNQILMCSLGKPIQYHMLPHRLTVPTPVATIVPTSGSVSSSPT----- 67

Query: 216 ASGEMTAVSAVCDHSKDSSDLVALKISLLGDDHIGKTSFLVGF 88
            S        V  H    SDLVALKISLLGD  IGKTSFL  +
Sbjct: 68  -SSPPPPPMCVSHHDHKDSDLVALKISLLGDCQIGKTSFLAKY 109


>ref|NP_850621.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
           gi|332643020|gb|AEE76541.1| Ras-related small
           GTP-binding family protein [Arabidopsis thaliana]
          Length = 248

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
 Frame = -3

Query: 384 RVAILRRCAGSLWDQVLACWIGKPICYRQILESGPTATVCHRFPSG--EMGPSCADGYAS 211
           R+ ILRR    LW +++AC  GK   Y  +  + P+ TV    PS    +      G   
Sbjct: 21  RILILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGG 80

Query: 210 GEMTAVSAVC-----DHSKDSSDLVALKISLLGDDHIGKTSFLVGF 88
           GE    S+V       H +  SDLV+LKISLLGD  IGKTSFL  +
Sbjct: 81  GEFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKY 126


>ref|NP_850622.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
           gi|11994637|dbj|BAB02832.1| unnamed protein product
           [Arabidopsis thaliana] gi|22316556|emb|CAD44270.1|
           monomeric G-protein [Arabidopsis thaliana]
           gi|332643018|gb|AEE76539.1| Ras-related small
           GTP-binding family protein [Arabidopsis thaliana]
          Length = 292

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
 Frame = -3

Query: 384 RVAILRRCAGSLWDQVLACWIGKPICYRQILESGPTATVCHRFPSG--EMGPSCADGYAS 211
           R+ ILRR    LW +++AC  GK   Y  +  + P+ TV    PS    +      G   
Sbjct: 21  RILILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGG 80

Query: 210 GEMTAVSAVC-----DHSKDSSDLVALKISLLGDDHIGKTSFLVGF 88
           GE    S+V       H +  SDLV+LKISLLGD  IGKTSFL  +
Sbjct: 81  GEFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKY 126


>ref|NP_566690.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
           gi|21592655|gb|AAM64604.1| putative SGP1 monomeric
           G-protein [Arabidopsis thaliana]
           gi|332643019|gb|AEE76540.1| Ras-related small
           GTP-binding family protein [Arabidopsis thaliana]
          Length = 291

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
 Frame = -3

Query: 384 RVAILRRCAGSLWDQVLACWIGKPICYRQILESGPTATVCHRFPSG--EMGPSCADGYAS 211
           R+ ILRR    LW +++AC  GK   Y  +  + P+ TV    PS    +      G   
Sbjct: 21  RILILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGG 80

Query: 210 GEMTAVSAVC-----DHSKDSSDLVALKISLLGDDHIGKTSFLVGF 88
           GE    S+V       H +  SDLV+LKISLLGD  IGKTSFL  +
Sbjct: 81  GEFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKY 126


>ref|XP_002523001.1| sgp1 monomeric G-protein, putative [Ricinus communis]
           gi|223537813|gb|EEF39431.1| sgp1 monomeric G-protein,
           putative [Ricinus communis]
          Length = 245

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/102 (38%), Positives = 56/102 (54%)
 Frame = -3

Query: 393 IVWRVAILRRCAGSLWDQVLACWIGKPICYRQILESGPTATVCHRFPSGEMGPSCADGYA 214
           I+ RV++ R+    +WD++LAC IGKP+ YR++    P++       +G   PS      
Sbjct: 18  ILERVSVFRQFFQFIWDRILACSIGKPVRYRRLTRQ-PSSPPPEAIEAGGFAPS------ 70

Query: 213 SGEMTAVSAVCDHSKDSSDLVALKISLLGDDHIGKTSFLVGF 88
                 +S+        SDLV LKISLLGD  IGKTSF+V +
Sbjct: 71  ----EELSSRFSGYNADSDLVPLKISLLGDCRIGKTSFVVKY 108


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