BLASTX nr result

ID: Atractylodes21_contig00052004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052004
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplasti...    64   1e-08
gb|AFK35741.1| unknown [Lotus japonicus]                               63   2e-08
ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chlorop...    63   3e-08
ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago t...    62   4e-08
ref|XP_002324928.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
           iron-sulfur protein TIC55; AltName: Full=Translocon at
           the inner envelope membrane of chloroplasts 55;
           Short=PsTIC55; Flags: Precursor
           gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein
           Tic55 [Pisum sativum]
          Length = 553

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = -3

Query: 500 VVAAISGFAILLSGGQWKALLLLSTTVCMTGAYMCSTVVAMNTTNLVR 357
           VV A++  AIL+SG QWK LLL S ++C  G Y CST +AMNTTN +R
Sbjct: 501 VVVALAALAILVSGRQWKVLLLASASLCSVGVYACSTAIAMNTTNFIR 548


>gb|AFK35741.1| unknown [Lotus japonicus]
          Length = 210

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = -3

Query: 500 VVAAISGFAILLSGGQWKALLLLSTTVCMTGAYMCSTVVAMNTTNLVR 357
           V  A +  AIL+SG QWKALLL+S ++C  G Y CST +AMNTTN +R
Sbjct: 158 VAVASAALAILVSGRQWKALLLVSASLCSVGVYACSTAIAMNTTNFIR 205


>ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
           max]
          Length = 532

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = -3

Query: 500 VVAAISGFAILLSGGQWKALLLLSTTVCMTGAYMCSTVVAMNTTNLVR 357
           V  A++  AILLSG QWK LLL S  +C  G Y CST +AMNTTN +R
Sbjct: 480 VAIALTALAILLSGRQWKVLLLASAALCSVGVYACSTAIAMNTTNFIR 527


>ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
           gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein
           Tic55 [Medicago truncatula]
          Length = 552

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = -3

Query: 500 VVAAISGFAILLSGGQWKALLLLSTTVCMTGAYMCSTVVAMNTTNLVR 357
           VV A++  AIL++G QWKA+LL S  +C  G Y CST VA+NTTN +R
Sbjct: 500 VVVALAALAILVTGRQWKAILLASAALCSVGVYACSTAVALNTTNFIR 547


>ref|XP_002324928.1| predicted protein [Populus trichocarpa] gi|222866362|gb|EEF03493.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = -3

Query: 500 VVAAISGFAILLSGGQWKALLLLSTTVCMTGAYMCSTVVAMNTTNLVR 357
           +  A++  AIL SG QWK  LL+S ++C+ G Y CST +AMNTTN +R
Sbjct: 497 ISVALTALAILASGRQWKTFLLVSASLCLAGVYACSTAIAMNTTNFIR 544


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