BLASTX nr result

ID: Atractylodes21_contig00051872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051872
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        138   5e-31
gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subc...   106   2e-21
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   106   2e-21
emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]           106   2e-21
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   104   9e-21

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -3

Query: 226 EYFTREFDTFCEENGIKHERTSPFTPQQNGLAERKNRSLVEMVNCMLNQSGLPNNLWGEA 47
           EYF R FD FCEE GI HERT+P+TPQQNGLAERKNR+LVEM NCMLNQSGLP N+WGEA
Sbjct: 623 EYFNRRFDAFCEEEGIIHERTAPYTPQQNGLAERKNRTLVEMANCMLNQSGLPRNMWGEA 682

Query: 46  LLTACHIHNRITSRV 2
           +LTAC++HNRITSRV
Sbjct: 683 VLTACYVHNRITSRV 697


>gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 991

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/74 (63%), Positives = 60/74 (81%)
 Frame = -3

Query: 226 EYFTREFDTFCEENGIKHERTSPFTPQQNGLAERKNRSLVEMVNCMLNQSGLPNNLWGEA 47
           EYF+ EF +FCEE GI HERT+P++PQ NG+AERKNR+L EMVN ML+ +GL    WGEA
Sbjct: 344 EYFSNEFISFCEEYGIIHERTAPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEA 403

Query: 46  LLTACHIHNRITSR 5
           +LTACH+ NRI ++
Sbjct: 404 ILTACHVLNRIPTK 417


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/74 (63%), Positives = 59/74 (79%)
 Frame = -3

Query: 226 EYFTREFDTFCEENGIKHERTSPFTPQQNGLAERKNRSLVEMVNCMLNQSGLPNNLWGEA 47
           EYF+ EF +FCEE GI HERT P++PQ NG+AERKNR+L EMVN ML+ +GL    WGEA
Sbjct: 528 EYFSNEFTSFCEEYGIIHERTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEA 587

Query: 46  LLTACHIHNRITSR 5
           +LTACH+ NRI ++
Sbjct: 588 ILTACHVLNRIPTK 601


>emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]
          Length = 964

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = -3

Query: 226 EYFTREFDTFCEENGIKHERTSPFTPQQNGLAERKNRSLVEMVNCMLNQSGLPNNLWGEA 47
           EYF+ EF +FCEE GI HERT P++PQ NG+AERKNR+L+EMVN ML+ +GL N  WGEA
Sbjct: 292 EYFSNEFTSFCEEFGIIHERTPPYSPQSNGVAERKNRTLIEMVNAMLDTAGLSNEWWGEA 351

Query: 46  LLTACHIHNRI 14
           + TACH+ N+I
Sbjct: 352 IFTACHVLNKI 362


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/71 (69%), Positives = 58/71 (81%)
 Frame = -3

Query: 226 EYFTREFDTFCEENGIKHERTSPFTPQQNGLAERKNRSLVEMVNCMLNQSGLPNNLWGEA 47
           EYF+ EF++FCEE GI HE T+P+TPQ NG+AERKNR+ +EMVN ML  + L  NLWGEA
Sbjct: 570 EYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNXMLLHAKLNFNLWGEA 629

Query: 46  LLTACHIHNRI 14
           LLTACHI NRI
Sbjct: 630 LLTACHILNRI 640


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