BLASTX nr result

ID: Atractylodes21_contig00051798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051798
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40494.2| Putative microtubule-associated protein, identica...    44   3e-08
ref|XP_004148126.1| PREDICTED: 65-kDa microtubule-associated pro...    40   4e-06

>gb|AAT40494.2| Putative microtubule-associated protein, identical [Solanum
           demissum]
          Length = 722

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +1

Query: 346 KKCEKGVRLSCGGSGATGNRRLPLGGAAQTTPKSDL-HSIRTTPSNR 483
           +  +KG +LSCGG  A  NRRL LGG  Q T K++L HS + TP+ R
Sbjct: 496 QSAKKGPKLSCGG--APSNRRLSLGGTMQQTCKTELPHSTKATPNTR 540



 Score = 38.9 bits (89), Expect(2) = 3e-08
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +3

Query: 270 DQKKLQGQFIAEPDTLFGSKLRSMRQKMRKRG 365
           DQKKLQGQ +AE ++L+GSK   M+ +  K+G
Sbjct: 470 DQKKLQGQLMAEQESLYGSKPSPMKNQSAKKG 501


>ref|XP_004148126.1| PREDICTED: 65-kDa microtubule-associated protein 3-like [Cucumis
           sativus] gi|449499658|ref|XP_004160877.1| PREDICTED:
           65-kDa microtubule-associated protein 3-like [Cucumis
           sativus]
          Length = 730

 Score = 39.7 bits (91), Expect(2) = 4e-06
 Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = +1

Query: 355 EKGVRLSCGGSGA---TGNRRLPLGGAAQTTPKSDLHSIR 465
           +KG R+S GG+GA   TG+RR  LGGA   TPK D   +R
Sbjct: 511 KKGPRMSTGGAGAVAGTGSRRFSLGGALLQTPKPDHKGLR 550



 Score = 36.2 bits (82), Expect(2) = 4e-06
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +3

Query: 270 DQKKLQGQFIAEPDTLFGSKLRSMRQKMRKRG 365
           DQKKLQGQ IAE + L+GSK    + +  K+G
Sbjct: 482 DQKKLQGQLIAEQEALYGSKPSPSKPQSVKKG 513


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