BLASTX nr result

ID: Atractylodes21_contig00051760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051760
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]   138   5e-31
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   116   2e-24
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...   108   6e-22
ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]
          Length = 1384

 Score =  138 bits (347), Expect = 5e-31
 Identities = 75/122 (61%), Positives = 86/122 (70%)
 Frame = -3

Query: 371  RYAQNNASSGGRRPSIPKEVNVETEPVGLSGWTHHGEDDIQSEGKASSSLAPMINIPQPG 192
            +YAQ++++SG R PS  KE+ VETE VGLSGW  +GED+IQS+GK S  LAP I IPQP 
Sbjct: 847  KYAQSHSNSG-RYPSSRKEIGVETESVGLSGWNRYGEDEIQSQGKGSVPLAPTIPIPQPE 905

Query: 191  LKAFPNKTKAESVLPASKWARXXXXXXXEQKKSTRDLGLSYSSSGSENGVGGLSNTREME 12
            LKAF NK K + VLPASKWAR       EQK+S R LGLSYSSSGSEN   G     EME
Sbjct: 906  LKAFTNKGKTDPVLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPXKADEME 965

Query: 11   LA 6
             A
Sbjct: 966  FA 967


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
            predicted protein [Populus trichocarpa]
          Length = 988

 Score =  122 bits (306), Expect = 3e-26
 Identities = 68/122 (55%), Positives = 80/122 (65%)
 Frame = -3

Query: 371  RYAQNNASSGGRRPSIPKEVNVETEPVGLSGWTHHGEDDIQSEGKASSSLAPMINIPQPG 192
            + AQ+N+SS  R  S+ +EVNV+  PVGL+GW  +GEDD  S+ K S SL   + IPQP 
Sbjct: 697  KIAQSNSSSS-RYSSVHREVNVDPGPVGLTGWNIYGEDDTPSQNKRSVSLVSTLPIPQPE 755

Query: 191  LKAFPNKTKAESVLPASKWARXXXXXXXEQKKSTRDLGLSYSSSGSENGVGGLSNTREME 12
            LKAF  K K + VLPASKWAR       EQK+S RDLGLSYSSSGSEN   G     EME
Sbjct: 756  LKAFAKKEKNDPVLPASKWARDDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEME 815

Query: 11   LA 6
             A
Sbjct: 816  FA 817


>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
            [Glycine max]
          Length = 971

 Score =  116 bits (290), Expect = 2e-24
 Identities = 65/122 (53%), Positives = 81/122 (66%)
 Frame = -3

Query: 371  RYAQNNASSGGRRPSIPKEVNVETEPVGLSGWTHHGEDDIQSEGKASSSLAPMINIPQPG 192
            +YA N  SSG +  S  +E + E +PVGLS W H+G++DIQS+G++S  LAP + IPQP 
Sbjct: 686  KYAHNQVSSG-KYSSNQRETSAELDPVGLSAWNHYGDEDIQSQGRSSVPLAPTLPIPQPK 744

Query: 191  LKAFPNKTKAESVLPASKWARXXXXXXXEQKKSTRDLGLSYSSSGSENGVGGLSNTREME 12
            LKAF  K K + VLPASKWAR       EQ +S ++LGLSYSSSGSEN   GL    E E
Sbjct: 745  LKAFTKKEKNDPVLPASKWAREDDESDDEQ-RSGKNLGLSYSSSGSENVDDGLVKADESE 803

Query: 11   LA 6
             A
Sbjct: 804  SA 805


>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
            gi|355522973|gb|AET03427.1| U2-associated protein SR140
            [Medicago truncatula]
          Length = 1139

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/117 (49%), Positives = 74/117 (63%)
 Frame = -3

Query: 356  NASSGGRRPSIPKEVNVETEPVGLSGWTHHGEDDIQSEGKASSSLAPMINIPQPGLKAFP 177
            N +S G+  S  +E + + EP+GLSG  H+G++D+Q +GK  + LAP + IPQP LKAF 
Sbjct: 757  NQTSSGKNSSGQRETSADPEPMGLSGLNHYGDEDLQLQGKGYAPLAPTLPIPQPELKAFA 816

Query: 176  NKTKAESVLPASKWARXXXXXXXEQKKSTRDLGLSYSSSGSENGVGGLSNTREMELA 6
             K K + VLPASKWAR       EQ K  ++LGLSYSSSGSEN    L    E E A
Sbjct: 817  KKEKNDLVLPASKWAREDDESDDEQGKGGKNLGLSYSSSGSENVGDDLIKADESEAA 873


>ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1|
           predicted protein [Populus trichocarpa]
          Length = 955

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/99 (54%), Positives = 65/99 (65%)
 Frame = -3

Query: 302 TEPVGLSGWTHHGEDDIQSEGKASSSLAPMINIPQPGLKAFPNKTKAESVLPASKWARXX 123
           ++PVG +GW  +GED++ S+ K S S+A  + I QP LKAF  K K + VLPASKWAR  
Sbjct: 693 SKPVGSTGWNVYGEDEMPSQNKGSVSVASTLLIKQPELKAFAKKEKNDPVLPASKWARDD 752

Query: 122 XXXXXEQKKSTRDLGLSYSSSGSENGVGGLSNTREMELA 6
                EQK+S RDLGLSYSSSGSEN   G     EME A
Sbjct: 753 DESDDEQKRSARDLGLSYSSSGSENAGDGQGKADEMEFA 791


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