BLASTX nr result

ID: Atractylodes21_contig00051654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051654
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86259.1| RabGAP/TBC domain-containing protein-like [Solanu...    57   1e-06
ref|XP_002518065.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>gb|ABB86259.1| RabGAP/TBC domain-containing protein-like [Solanum tuberosum]
          Length = 387

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 17/69 (24%)
 Frame = +2

Query: 302 EIRDPLT--------RNGGSDNDISPSV---------EDVSRQSKLLQELSKKIINMGEL 430
           EIRDPL+         NG S +  + S          ED+SRQ++L QELS+KIINMGE+
Sbjct: 22  EIRDPLSSTNYHSDDENGSSASSTTTSASAAAAISSAEDISRQAQLCQELSRKIINMGEV 81

Query: 431 RRLASLGIP 457
           RRLAS GIP
Sbjct: 82  RRLASQGIP 90


>ref|XP_002518065.1| conserved hypothetical protein [Ricinus communis]
           gi|223542661|gb|EEF44198.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 468

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = +2

Query: 320 TRNGGSDNDIS---PSVEDVSRQSKLLQELSKKIINMGELRRLASLGIP 457
           + N   DND S   PS ED+SRQ++LL ELS+K++N+ ELRR+AS GIP
Sbjct: 94  SNNKDDDNDASITSPSAEDISRQAQLLTELSRKVVNIKELRRIASQGIP 142


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