BLASTX nr result

ID: Atractylodes21_contig00051639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051639
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   134   1e-29
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...   132   2e-29
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   130   9e-29
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              130   9e-29
gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group...   130   9e-29

>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Glycine max]
          Length = 1319

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/75 (86%), Positives = 70/75 (93%)
 Frame = +2

Query: 11  PSSTPGKKSASSPRLFIKEMVMKNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAML 190
           P S   ++S++ PRLFIKEMVM+NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAML
Sbjct: 86  PDSATRRRSSARPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAML 145

Query: 191 FVFGKRAKQMRLNKV 235
           FVFGKRAKQMRLNKV
Sbjct: 146 FVFGKRAKQMRLNKV 160


>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Glycine max]
          Length = 1242

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = +2

Query: 11  PSSTPGKKSASSPRLFIKEMVMKNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAML 190
           P S    +S++ PRLFIKEMVM+NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAML
Sbjct: 9   PDSATRHRSSARPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAML 68

Query: 191 FVFGKRAKQMRLNKV 235
           FVFGKRAKQMRLNKV
Sbjct: 69  FVFGKRAKQMRLNKV 83


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score =  130 bits (328), Expect = 9e-29
 Identities = 67/78 (85%), Positives = 69/78 (88%)
 Frame = +2

Query: 2   STDPSSTPGKKSASSPRLFIKEMVMKNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVID 181
           S    S PG+  A  PRLFIKEMVM+NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVID
Sbjct: 252 SNGSDSGPGRSRA--PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVID 309

Query: 182 AMLFVFGKRAKQMRLNKV 235
           AMLFVFGKRAKQMRLNKV
Sbjct: 310 AMLFVFGKRAKQMRLNKV 327


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  130 bits (328), Expect = 9e-29
 Identities = 67/78 (85%), Positives = 69/78 (88%)
 Frame = +2

Query: 2   STDPSSTPGKKSASSPRLFIKEMVMKNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVID 181
           S    S PG+  A  PRLFIKEMVM+NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVID
Sbjct: 13  SNGSDSGPGRSRA--PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVID 70

Query: 182 AMLFVFGKRAKQMRLNKV 235
           AMLFVFGKRAKQMRLNKV
Sbjct: 71  AMLFVFGKRAKQMRLNKV 88


>gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group]
           gi|218197032|gb|EEC79459.1| hypothetical protein
           OsI_20467 [Oryza sativa Indica Group]
           gi|222632094|gb|EEE64226.1| hypothetical protein
           OsJ_19059 [Oryza sativa Japonica Group]
          Length = 1241

 Score =  130 bits (328), Expect = 9e-29
 Identities = 64/75 (85%), Positives = 70/75 (93%)
 Frame = +2

Query: 11  PSSTPGKKSASSPRLFIKEMVMKNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAML 190
           P+ +PG+  A  PRLFIKEMV++NFKSYAGEQR+GPFHKSFSAVVGPNGSGKSNVIDAML
Sbjct: 9   PAPSPGR--AGRPRLFIKEMVLRNFKSYAGEQRIGPFHKSFSAVVGPNGSGKSNVIDAML 66

Query: 191 FVFGKRAKQMRLNKV 235
           FVFGKRAKQMRLNKV
Sbjct: 67  FVFGKRAKQMRLNKV 81


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