BLASTX nr result

ID: Atractylodes21_contig00051616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051616
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL63120.1| AT-hook DNA-binding protein [Catharanthus roseus]       59   3e-07
ref|XP_004148420.1| PREDICTED: putative DNA-binding protein ESCA...    56   3e-06

>gb|ABL63120.1| AT-hook DNA-binding protein [Catharanthus roseus]
          Length = 335

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
 Frame = -1

Query: 221 PLYH*LPMDEDDHVSSSYGGSAFVVREQSPSYNGDDSSGHNH------TSLLMMEDSLSM 60
           P YH LP+++D   S S GG+      QSPS       G +       +S  M    +S+
Sbjct: 250 PQYHRLPLEDDQRNSGSAGGTGQEGHHQSPSATSGGDDGRSPAAPVGGSSAGMDSCGVSL 309

Query: 59  YSCPLPSDVIWAPTPRQAP 3
           +SC LPSDVIWAPT RQ P
Sbjct: 310 FSCHLPSDVIWAPTARQPP 328


>ref|XP_004148420.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Cucumis
           sativus] gi|449529176|ref|XP_004171577.1| PREDICTED:
           putative DNA-binding protein ESCAROLA-like [Cucumis
           sativus]
          Length = 286

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/74 (44%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 PLYH*LPMDEDDHVSSSYGGSAFVVREQSPSYNGDDSSGHNHTSLLMMED-SLSMYSCPL 45
           P YH LP +E+     S GGS            G DSSG  H    + E   ++MYSC  
Sbjct: 210 PFYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGQGHGHGQIAETCGMAMYSCHA 269

Query: 44  PSDVIWAPTPRQAP 3
           PSDVIWAPT RQ P
Sbjct: 270 PSDVIWAPTARQPP 283


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