BLASTX nr result

ID: Atractylodes21_contig00051591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051591
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    71   1e-10
emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    67   1e-09
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    66   3e-09
ref|XP_002522567.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    61   1e-07

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 29/129 (22%)
 Frame = -3

Query: 376 EIRLMNPLTLSEAMELASKIEVKNRLVVKER-------YSSFNRRNVNN----------S 248
           EIR++NP  L +AMELA K+E +NR+    R       +S +NR   +N           
Sbjct: 305 EIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNPSLPSVYGSQG 364

Query: 247 GEGKGTVSSVGSQNSSTTKQGS------------EFRRLSDEEVQHMRSLGLCYRCDEKF 104
           G    T S   + N+S T   +            E RRL+++E+Q  R+ GLC++CDEK+
Sbjct: 365 GSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKW 424

Query: 103 SPGHKCKKK 77
             GH+C++K
Sbjct: 425 GVGHQCRRK 433


>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/99 (41%), Positives = 53/99 (53%)
 Frame = -3

Query: 376 EIRLMNPLTLSEAMELASKIEVKNRLVVKERYSSFNRRNVNNSGEGKGTVSSVGSQNSST 197
           +++ M P TLS A+ LA   EVK       + SSFN        E K TVS+  +  S  
Sbjct: 285 DVQAMKPPTLSAAVGLARLYEVKYH-----KRSSFNL-------EPKKTVSTNSTVTSRP 332

Query: 196 TKQGSEFRRLSDEEVQHMRSLGLCYRCDEKFSPGHKCKK 80
                  RRLS  E++  R  GLC+ CDEKF+PGH+CKK
Sbjct: 333 LSSTPAIRRLSPTEMKERRDKGLCFNCDEKFAPGHRCKK 371


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 38/138 (27%)
 Frame = -3

Query: 376 EIRLMNPLTLSEAMELASKIEVKNRLVVKERY----SSFNRRNVNN-----SGEGKGTVS 224
           E+R+M P +L  AMELA ++E K     K+++    SS++  N N+     +   K T S
Sbjct: 230 EVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSAHNPNSYIPKPTLSAKPTYS 289

Query: 223 ------------------------SVGSQNSSTT-----KQGSEFRRLSDEEVQHMRSLG 131
                                   S+ S N   T     K   E RRLS++E+Q+ R  G
Sbjct: 290 FNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKPFGEIRRLSEKELQYKREHG 349

Query: 130 LCYRCDEKFSPGHKCKKK 77
           LC+RCDEK++ GH+CKKK
Sbjct: 350 LCFRCDEKWAIGHRCKKK 367


>ref|XP_002522567.1| conserved hypothetical protein [Ricinus communis]
           gi|223538258|gb|EEF39867.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
 Frame = -3

Query: 376 EIRLMNPLTLSEAMELASKIEVKNRLVVKE----RYSSFNRRNVNNSGEGKGTVSS--VG 215
           ++++  P TL++A+ +   +E +NRL  K     R+      +  NS    G +    V 
Sbjct: 69  DVKIKQPKTLADAIGVTRLVEERNRLQKKSPDPSRFQPATTASKINSTSASGVLGPRPVQ 128

Query: 214 SQNSSTTKQGSEFRRLSDEEVQHMRSLGLCYRCDEKFSPGHKCKK 80
             N +     + FRR++++EV+  +  GLCY CDEKF+PGH+C++
Sbjct: 129 RGNPNANANPTTFRRITNQEVRERQEKGLCYYCDEKFTPGHRCQR 173


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
 Frame = -3

Query: 376 EIRLMNPLTLSEAMELASKIEVKNRLVVKE-RYSSFNRRNVNNSGEGKGTVSSVGS---- 212
           ++++  P TL++ + +A  IE +N+L  K  + + F   +V        T   +G     
Sbjct: 213 DVKIKQPRTLADTIGVARLIEERNQLQRKPTQQTRFQPASVTPKASPNPTAGVLGPPPTQ 272

Query: 211 -QNSSTTKQGSEFRRLSDEEVQHMRSLGLCYRCDEKFSPGHKCKK 80
             N S+  Q + F R++++E +  R  GLCY CDEKF  GH+C++
Sbjct: 273 HMNQSSNAQPATFHRITNQEARERREKGLCYYCDEKFVAGHRCER 317


Top