BLASTX nr result
ID: Atractylodes21_contig00051586
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00051586
(345 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi... 135 3e-30
ref|XP_002305039.1| predicted protein [Populus trichocarpa] gi|2... 131 7e-29
ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,... 129 3e-28
ref|XP_002880834.1| pentatricopeptide repeat-containing protein ... 125 5e-27
>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 135 bits (341), Expect = 3e-30
Identities = 63/113 (55%), Positives = 87/113 (76%)
Frame = +2
Query: 2 SIMQCLCCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSK 181
SI+QCLC +GM ++ V +F +F +SG+FLD+V +NI +DALCKL K++EA+ LL EMK +
Sbjct: 372 SILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 431
Query: 182 KMDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGLSR 340
+M DVVHYTTLI GYCL + +A +FEEMK G++PDI+T+N+L G SR
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSR 484
Score = 63.9 bits (154), Expect = 1e-08
Identities = 34/112 (30%), Positives = 57/112 (50%)
Frame = +2
Query: 5 IMQCLCCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSKK 184
++ LC G A+ + V +++ + I A C+ M A ++ + +
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 638
Query: 185 MDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGLSR 340
+ PDV+ YT +INGYC + A IF +MK G+KPD+IT+ V+ G S+
Sbjct: 639 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 690
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/98 (30%), Positives = 51/98 (52%)
Frame = +2
Query: 41 DAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSKKMDPDVVHYTTLI 220
DA + + E G+ D V + + ID+ CK + +A+ L EM ++ + PD+V YT L+
Sbjct: 711 DASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALL 770
Query: 221 NGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGL 334
+ C + A + EM G++PD +VL G+
Sbjct: 771 SSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGI 808
>ref|XP_002305039.1| predicted protein [Populus trichocarpa] gi|222848003|gb|EEE85550.1|
predicted protein [Populus trichocarpa]
Length = 800
Score = 131 bits (329), Expect = 7e-29
Identities = 60/113 (53%), Positives = 85/113 (75%)
Frame = +2
Query: 2 SIMQCLCCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSK 181
+I+Q C GM + V F F + +FLD+VS+NI +DALCKL K+D+A+ LL EMK K
Sbjct: 379 TILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGK 438
Query: 182 KMDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGLSR 340
+MD D++HYTTLINGYC + + +AF++FEEM+G GL+PD++TFN+L + SR
Sbjct: 439 QMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSR 491
>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 129 bits (324), Expect = 3e-28
Identities = 62/112 (55%), Positives = 85/112 (75%)
Frame = +2
Query: 5 IMQCLCCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSKK 184
I+ CL +GM + V +F + ESG+FLD V++NI DALC L K+++A+ +++EMKSK+
Sbjct: 376 ILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKR 435
Query: 185 MDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGLSR 340
+ DV HYTTLINGYCL + AF +F+EMK GLKPDI+T+NVLA+GLSR
Sbjct: 436 LGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSR 487
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/109 (34%), Positives = 55/109 (50%)
Frame = +2
Query: 5 IMQCLCCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSKK 184
++ LC G + AV + S V K+ ++ + ALC+ M A L +
Sbjct: 582 LLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRG 641
Query: 185 MDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASG 331
PDVV YT +IN YC + A +F++MK G+KPD+ITF VL G
Sbjct: 642 FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDG 690
Score = 57.4 bits (137), Expect = 1e-06
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Frame = +2
Query: 20 CCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLW-----------KMDEAMV--L 160
C + L +A F D G+ D ++F + +D K + K V +
Sbjct: 657 CRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTI 716
Query: 161 LQEMKSKKMDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGL 334
L++M+ K++PDVV YT L++G+ A +F++M +GL+PD IT+ L SGL
Sbjct: 717 LRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGL 774
>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 913
Score = 129 bits (324), Expect = 3e-28
Identities = 61/113 (53%), Positives = 84/113 (74%)
Frame = +2
Query: 2 SIMQCLCCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSK 181
SI+ CLC LGM ++ V +F F G+FLD VS+N +DALCKL K++EA+ LL EMK K
Sbjct: 378 SILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMK 437
Query: 182 KMDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGLSR 340
+++ DV+HYTTLINGYC +AFK+FEEM+ NG++ D++T++VL SG R
Sbjct: 438 QINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCR 490
Score = 69.7 bits (169), Expect = 2e-10
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 15/119 (12%)
Frame = +2
Query: 20 CCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDA-----LCKLWK----------MDEAM 154
C + L +AV F D + G+ D V+F + +D + K++ + +A+
Sbjct: 662 CRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDAL 721
Query: 155 VLLQEMKSKKMDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASG 331
+ EMK ++ PDV+ YT LI+GYC + +A +F+EM GL+PDIIT+ L SG
Sbjct: 722 AIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSG 780
Score = 56.2 bits (134), Expect = 3e-06
Identities = 25/98 (25%), Positives = 53/98 (54%)
Frame = +2
Query: 41 DAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSKKMDPDVVHYTTLI 220
DA+ + + ++ + D + + + ID CK+ + +A+ + EM + ++PD++ YT L+
Sbjct: 719 DALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALL 778
Query: 221 NGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGL 334
+G C + A + ++M G+ PD T + L G+
Sbjct: 779 SGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGI 816
>ref|XP_002880834.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297326673|gb|EFH57093.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 797
Score = 125 bits (313), Expect = 5e-27
Identities = 58/113 (51%), Positives = 84/113 (74%)
Frame = +2
Query: 2 SIMQCLCCLGMLADAVYRFMDFMESGVFLDKVSFNIAIDALCKLWKMDEAMVLLQEMKSK 181
SI+QC C + M +A+ +F +F + +FLD+V +N+A DAL KL +++EA+ LLQEMK K
Sbjct: 357 SILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAIELLQEMKDK 416
Query: 182 KMDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGLKPDIITFNVLASGLSR 340
+ PDV++YTTLI+GYCL + +A + +EM GNG PD+IT+NVL SGL+R
Sbjct: 417 GIVPDVINYTTLIDGYCLKGKVVDALDLIDEMIGNGTSPDLITYNVLVSGLAR 469
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +2
Query: 113 IDALCKLWKMDEAMVLLQEMKSKKMDPDVVHYTTLINGYCLLREPWNAFKIFEEMKGNGL 292
I ALC+L +A L M + + PD+ YT +I+ YC L E A +FE+MK G+
Sbjct: 597 IGALCRLNNAIDAQQLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 656
Query: 293 KPDIITFNVL 322
KPD++T+ VL
Sbjct: 657 KPDVVTYTVL 666