BLASTX nr result

ID: Atractylodes21_contig00051496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051496
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28471.1| polyprotein, partial [Ananas comosus]                   87   1e-15
gb|ACB28470.1| polyprotein, partial [Ananas comosus]                   87   1e-15
gb|ACB28469.1| polyprotein, partial [Ananas comosus]                   85   7e-15
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo...    73   3e-11
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc...    70   1e-10

>gb|ACB28471.1| polyprotein, partial [Ananas comosus]
          Length = 546

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/81 (46%), Positives = 58/81 (71%)
 Frame = -2

Query: 253 RPSKYSSIHEEQICRYSSGTYKEKGRLTSLDFEVLAFIYSCEAFALFIMGNKEITLRTDC 74
           R +KYS   EE++C Y+SG Y+E+G+++S+D E+LA IY+ +AF L ++  +EIT+RTDC
Sbjct: 178 RSNKYSDTKEEKLCGYASGKYRERGKISSIDAELLAVIYALDAFKLNVINKQEITIRTDC 237

Query: 73  EALVKFADIKKESKLLSNRWL 11
           EA+ KF+  K E      RW+
Sbjct: 238 EAITKFSHKKDEKASSRRRWI 258


>gb|ACB28470.1| polyprotein, partial [Ananas comosus]
          Length = 551

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/81 (46%), Positives = 58/81 (71%)
 Frame = -2

Query: 253 RPSKYSSIHEEQICRYSSGTYKEKGRLTSLDFEVLAFIYSCEAFALFIMGNKEITLRTDC 74
           R +KYS   EE++C Y+SG Y+E+G+++S+D E+LA IY+ +AF L ++  +EIT+RTDC
Sbjct: 178 RSNKYSDTKEEKLCGYASGKYRERGKISSIDAELLAVIYALDAFKLNVINKQEITIRTDC 237

Query: 73  EALVKFADIKKESKLLSNRWL 11
           EA+ KF+  K E      RW+
Sbjct: 238 EAITKFSHKKDEKASSRRRWI 258


>gb|ACB28469.1| polyprotein, partial [Ananas comosus]
          Length = 630

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/81 (45%), Positives = 56/81 (69%)
 Frame = -2

Query: 253 RPSKYSSIHEEQICRYSSGTYKEKGRLTSLDFEVLAFIYSCEAFALFIMGNKEITLRTDC 74
           R +KYS   EE++C Y+SG Y+E+G+++S+D E+LA IY+ +AF L ++   EIT+RTDC
Sbjct: 178 RSNKYSDTKEEKLCGYASGKYRERGKISSIDAELLAVIYALDAFKLNVINKHEITIRTDC 237

Query: 73  EALVKFADIKKESKLLSNRWL 11
           EA+ KF+    E      RW+
Sbjct: 238 EAITKFSHKNDEKASSRRRWI 258


>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/82 (45%), Positives = 56/82 (68%)
 Frame = -2

Query: 256  KRPSKYSSIHEEQICRYSSGTYKEKGRLTSLDFEVLAFIYSCEAFALFIMGNKEITLRTD 77
            +RP+KYSS  EE++CRY+SG+YK K  + + D E+LA I +  AF L+ +G KE T+RTD
Sbjct: 1602 QRPTKYSSKSEEKVCRYASGSYKLK-TVGNTDREILAIINAINAFRLY-LGFKEFTVRTD 1659

Query: 76   CEALVKFADIKKESKLLSNRWL 11
            CEA+ ++ +     K  + RW+
Sbjct: 1660 CEAICRYYNQLNSKKSSTRRWI 1681


>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 792

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/82 (42%), Positives = 56/82 (68%)
 Frame = -2

Query: 256 KRPSKYSSIHEEQICRYSSGTYKEKGRLTSLDFEVLAFIYSCEAFALFIMGNKEITLRTD 77
           +RP+K+S+  EE+ICRY+SG+YK K  + + D E++A I +  AF L+ +G KE T+RTD
Sbjct: 497 QRPTKFSAKSEEKICRYASGSYKLK-TVNNTDREIMAIINAINAFRLY-LGFKEFTVRTD 554

Query: 76  CEALVKFADIKKESKLLSNRWL 11
           CEA+ ++ +     K  + RW+
Sbjct: 555 CEAICRYYNQLNSKKSSTRRWI 576


Top