BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051467
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle...    82   5e-14
gb|AEE01491.1| coat protein [Blueberry red ringspot virus]             62   4e-08
ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf cu...    62   6e-08
gb|AFL90611.1| coat protein, partial [Blueberry red ringspot virus]    61   1e-07
gb|AFL90598.1| coat protein, partial [Blueberry red ringspot vir...    60   2e-07

>ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle virus]
           gi|18266819|sp|P15627.2|CAPSD_SOCMV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=Coat protein
           gi|11322952|emb|CAC16944.1| putative coat protein
           [Soybean chlorotic mottle virus]
          Length = 441

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = -2

Query: 469 LEPFICEFTKYYYRLDTSKQSQAL*--MFYQKLPQTVSRDVTGKFELSLKEGQVTNTLGA 296
           LE F+CEF   YY ++   +       + Y KLP+ V   V   F  S+   ++ NTLG 
Sbjct: 226 LENFLCEFQSRYYGINPIDRENLKVDLLLYAKLPEYVRTQVEAYFNASITSNKLDNTLGG 285

Query: 295 KITLLKAWMEDQCLQLQAKREAKILLCCDNQTNKIGQYGC 176
           +IT LK W  +QC Q  AKR+A + LCC    +KIG+YGC
Sbjct: 286 RITALKLWQTEQCNQKLAKRQASVGLCCSKIEDKIGKYGC 325


>gb|AEE01491.1| coat protein [Blueberry red ringspot virus]
          Length = 491

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
 Frame = -2

Query: 466 EPFICEFTKYYYRLDTSKQSQAL*MFYQKLPQTVSRDVTGKFELSLKEGQVTNTLGAKIT 287
           E F C+F  YYY L++S++S  + +F QKLP  +S+ +  +F+       V NTLG    
Sbjct: 240 EEFYCQFIHYYYMLESSERSAYMNVFIQKLPYPLSKTINDEFQNQKNANLVPNTLGGIAK 299

Query: 286 LLKAWMEDQCLQLQAKRE-AKILLCCDNQTNKIGQYGCDIR*DNTIVILVQENEKENGKN 110
           +++A++  QC + Q K +   +  CC        ++GC              N    G+ 
Sbjct: 300 VIRAYILLQCTKEQEKMQLINVTKCCPKFEYIPHKFGC------------SPNSSRRGRR 347

Query: 109 RNINQNTKKYTKRE 68
           R   + +K Y +R+
Sbjct: 348 RTKPKYSKYYKQRK 361


>ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf curling virus]
           gi|81991105|sp|Q7TD09.1|CAPSD_CYLCV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=coat protein
           gi|32305281|gb|AAP78923.1| putative capsid protein
           [Cestrum yellow leaf curling virus]
          Length = 501

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
 Frame = -2

Query: 460 FICEFTKYYYRLDTSKQSQAL*MFYQKLPQTVSRDVTGKFELSLKEGQVTNTLGAKITLL 281
           + CE+ KY+Y L   ++S  + +F QKLP    R +   F     E ++ NTLG  I ++
Sbjct: 278 YTCEYRKYFYMLTPDERSTYIELFLQKLPAPFGRKMMEGFRKETAENKIANTLGGAIDIV 337

Query: 280 KAWMEDQCLQLQAKRE--AKILLCCDNQTNKIGQYGC 176
           +  ++++C+Q   +R     + +CC        +YGC
Sbjct: 338 RRTIDEECIQRSYRRTIGGAVKICCKGNPEIPQRYGC 374


>gb|AFL90611.1| coat protein, partial [Blueberry red ringspot virus]
          Length = 262

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
 Frame = -2

Query: 466 EPFICEFTKYYYRLDTSKQSQAL*MFYQKLPQTVSRDVTGKFELSLKEGQVTNTLGAKIT 287
           E F C+F  YYY L+TS++S  + +F QKLP  +S+ +  +F+       + +TLG    
Sbjct: 97  EEFYCQFIHYYYMLETSERSAYMNVFIQKLPYPLSKTINDEFQNQKNANLIPDTLGGIAK 156

Query: 286 LLKAWMEDQCLQLQAKRE-AKILLCCDNQTNKIGQYGCDIR*DNTIVILVQENEKENGKN 110
           +++A++  QC + Q K +   +  CC        ++GC              N    G+ 
Sbjct: 157 VIRAYILLQCPREQEKMQLINVTKCCPKFEYIPHKFGC------------SPNSSRRGRR 204

Query: 109 RNINQNTKKYTKRE 68
           R   + +K Y +R+
Sbjct: 205 RTKPKYSKYYKQRK 218


>gb|AFL90598.1| coat protein, partial [Blueberry red ringspot virus]
           gi|390429361|gb|AFL90599.1| coat protein, partial
           [Blueberry red ringspot virus]
           gi|390429363|gb|AFL90600.1| coat protein, partial
           [Blueberry red ringspot virus]
          Length = 263

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
 Frame = -2

Query: 466 EPFICEFTKYYYRLDTSKQSQAL*MFYQKLPQTVSRDVTGKFELSLKEGQVTNTLGAKIT 287
           E F C+F  YYY L++S++S  + +F QKLP  +S+ +  +F+       + +TLG    
Sbjct: 97  EEFYCQFIHYYYMLESSERSAYMNIFIQKLPYPLSKTINDEFQNQKNANLIPDTLGGIAK 156

Query: 286 LLKAWMEDQCLQLQAKRE-AKILLCCDNQTNKIGQYGCDIR*DNTIVILVQENEKENGKN 110
           +++A++  QC + Q K +   +  CC        ++GC              N    G+ 
Sbjct: 157 VIRAYILLQCTKEQEKMQLINVTKCCPKFEYIPHKFGC------------SPNSSRRGRR 204

Query: 109 RNINQNTKKYTKREK 65
                   KY K+ K
Sbjct: 205 TTKKSKYSKYYKQRK 219