BLASTX nr result

ID: Atractylodes21_contig00051447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051447
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299253.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]    79   4e-13
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_002517553.1| pentatricopeptide repeat-containing protein,...    75   7e-12

>ref|XP_002299253.1| predicted protein [Populus trichocarpa] gi|222846511|gb|EEE84058.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = +2

Query: 17  NNYTFSFLLKCCVGLRDSNKGKEVHCLINKFGFQVDSYVVNALIDMYCKCGCLCYARQLF 196
           N YTFS +LK  VGL D NKGKEVH ++ + GF+ D  V NAL+DMY KCGC+ YAR +F
Sbjct: 125 NKYTFSIVLKAFVGLLDLNKGKEVHSMVKQLGFESDVCVANALVDMYSKCGCIGYARTVF 184

Query: 197 DRMSK 211
           DRM+K
Sbjct: 185 DRMAK 189


>emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]
          Length = 566

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/65 (56%), Positives = 46/65 (70%)
 Frame = +2

Query: 11  VPNNYTFSFLLKCCVGLRDSNKGKEVHCLINKFGFQVDSYVVNALIDMYCKCGCLCYARQ 190
           V N +TFS +LK CVGL D NKGKEVHC+I++ G      V N+ IDMYCKCG + Y R+
Sbjct: 123 VANKFTFSIVLKQCVGLMDFNKGKEVHCVISRTGLGNVVSVANSXIDMYCKCGHVGYGRK 182

Query: 191 LFDRM 205
           +FD M
Sbjct: 183 VFDGM 187


>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = +2

Query: 14  PNNYTFSFLLKCCVGLRDSNKGKEVHCLINKFGFQVDSYVVNALIDMYCKCGCLCYARQL 193
           PN +TF F+LK C  L+++++G+E+HC I +   + + YV  AL+D Y KCGCL  A+++
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176

Query: 194 FDRMSK 211
           FD+M K
Sbjct: 177 FDKMHK 182



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/66 (42%), Positives = 36/66 (54%)
 Frame = +2

Query: 14  PNNYTFSFLLKCCVGLRDSNKGKEVHCLINKFGFQVDSYVVNALIDMYCKCGCLCYARQL 193
           P   T + +L  C  L   + G   HC     GF  D+ + NALIDMY KCG +  AR++
Sbjct: 424 PEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKV 483

Query: 194 FDRMSK 211
           FDRM K
Sbjct: 484 FDRMHK 489


>ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
           gi|296082021|emb|CBI21026.3| unnamed protein product
           [Vitis vinifera]
          Length = 583

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
 Frame = +2

Query: 14  PNNYTFSFLLKCCVGLRDSNKGKEVHCLINKFGFQVDSYVVNALIDMYCKC-GCLCYARQ 190
           PN Y F F+LK C GLRD N GK VH  + KFGF  D +V N ++ MYC C G + +AR+
Sbjct: 107 PNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARK 166

Query: 191 LFDRMSK 211
           LFD M K
Sbjct: 167 LFDEMPK 173


>ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543185|gb|EEF44717.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = +2

Query: 14  PNNYTFSFLLKCCVGLRDSNKGKEVHCLINKFGFQVDSYVVNALIDMYCKCGCLCYARQL 193
           P+ YTF  +L+ C G  D  +GKE+HC + +FGF+ D   VNALI MY KCGC+  AR +
Sbjct: 201 PDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYVKCGCVGSARTV 260

Query: 194 FDRM 205
           FD+M
Sbjct: 261 FDKM 264


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