BLASTX nr result

ID: Atractylodes21_contig00051349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051349
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    94   9e-18
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...    92   3e-17

>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = +1

Query: 1   LKPSQKVNNALITTLCRLGMTRKATLALQNMKNSGFSADTLTYNVLIHGYCKSSHLNRAL 180
           LK +++V N+LIT LC LGMT++ATL L NM   G SADT+TYN LIHG+ KSSH+ +AL
Sbjct: 606 LKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKAL 665

Query: 181 HTFSQMLVEGLSPTISTY 234
            T++QML EG+SP I TY
Sbjct: 666 ATYTQMLNEGVSPGIRTY 683


>ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/78 (60%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   LKPSQKVNNALITTLCRLGMTRKATLALQNMKNSGFSADTLTYNVLIHGYCKSSHLNRAL 180
           LK  + V N LI+ LC+LGMTRKAT  L++M+  G  ADT TYN LIHGYC SSHL RA 
Sbjct: 425 LKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAF 484

Query: 181 HTFSQMLVEGLSPTISTY 234
            T+S ML E +SP I TY
Sbjct: 485 MTYSTMLSERVSPDIETY 502


>ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/78 (60%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   LKPSQKVNNALITTLCRLGMTRKATLALQNMKNSGFSADTLTYNVLIHGYCKSSHLNRAL 180
           LK  + V N LI+ LC+LGMTRKAT  L++M+  G  ADT TYN LIHGYC SSHL RA 
Sbjct: 439 LKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAF 498

Query: 181 HTFSQMLVEGLSPTISTY 234
            T+S ML E +SP I TY
Sbjct: 499 MTYSTMLSERVSPDIETY 516


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/78 (57%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   LKPSQKVNNALITTLCRLGMTRKATLALQNMKNSGFSADTLTYNVLIHGYCKSSHLNRAL 180
           L  +Q V N LIT LCRLGMT+KA + L  M   G SAD +TYN LI GYC  SH+ +A 
Sbjct: 686 LNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAF 745

Query: 181 HTFSQMLVEGLSPTISTY 234
           +T+SQMLV G+SP I+TY
Sbjct: 746 NTYSQMLVSGISPNITTY 763


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355503316|gb|AES84519.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/78 (56%), Positives = 54/78 (69%)
 Frame = +1

Query: 1    LKPSQKVNNALITTLCRLGMTRKATLALQNMKNSGFSADTLTYNVLIHGYCKSSHLNRAL 180
            L+ S  V N LIT  CRLGMTRKA + L  M   G SAD +TYN LI GYC  SH+ +AL
Sbjct: 771  LELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKAL 830

Query: 181  HTFSQMLVEGLSPTISTY 234
             T+SQM V+G++P I+TY
Sbjct: 831  KTYSQMFVDGIAPNITTY 848


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