BLASTX nr result

ID: Atractylodes21_contig00051346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051346
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20053.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]    94   1e-17
ref|XP_002883912.1| pentatricopeptide repeat-containing protein ...    82   6e-14
ref|NP_179165.1| pentatricopeptide repeat-containing protein [Ar...    80   2e-13

>emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/90 (46%), Positives = 61/90 (67%)
 Frame = -2

Query: 325 PPVTPQSLHKSISCSQWHFIEQISDTLTPTTISSALYNLRASPALVLKFTEYLNQSNTDV 146
           PP+T + + KS+  SQWHFIEQ+S  LTP  IS+ LYNL + P LV  F  +L+    D 
Sbjct: 45  PPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDT 104

Query: 145 ECYCLSFAIICQLPSPKLSIQFIKTVISSR 56
           + YCL+  ++ +LPSPKL++Q +K V+ +R
Sbjct: 105 KSYCLAVVLLARLPSPKLALQLLKQVMGTR 134


>ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/90 (46%), Positives = 61/90 (67%)
 Frame = -2

Query: 325 PPVTPQSLHKSISCSQWHFIEQISDTLTPTTISSALYNLRASPALVLKFTEYLNQSNTDV 146
           PP+T + + KS+  SQWHFIEQ+S  LTP  IS+ LYNL + P LV  F  +L+    D 
Sbjct: 67  PPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDT 126

Query: 145 ECYCLSFAIICQLPSPKLSIQFIKTVISSR 56
           + YCL+  ++ +LPSPKL++Q +K V+ +R
Sbjct: 127 KSYCLAVVLLARLPSPKLALQLLKQVMGTR 156


>emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/90 (46%), Positives = 61/90 (67%)
 Frame = -2

Query: 325 PPVTPQSLHKSISCSQWHFIEQISDTLTPTTISSALYNLRASPALVLKFTEYLNQSNTDV 146
           PP+T + + KS+  SQWHFIEQ+S  LTP  IS+ LYNL + P LV  F  +L+    D 
Sbjct: 67  PPITZEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDT 126

Query: 145 ECYCLSFAIICQLPSPKLSIQFIKTVISSR 56
           + YCL+  ++ +LPSPKL++Q +K V+ +R
Sbjct: 127 KSYCLAVVLLARLPSPKLALQLLKQVMETR 156


>ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329752|gb|EFH60171.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 623

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/97 (38%), Positives = 61/97 (62%)
 Frame = -2

Query: 325 PPVTPQSLHKSISCSQWHFIEQISDTLTPTTISSALYNLRASPALVLKFTEYLNQSNTDV 146
           PP+T + L +SI  SQWHFIE ++D L P+ +S+ L +L  +P L   F  +++    D 
Sbjct: 44  PPITSEVLLESIKSSQWHFIEHVTDKLIPSLVSTTLLSLVKTPDLAFNFVNHIDLRCLDF 103

Query: 145 ECYCLSFAIICQLPSPKLSIQFIKTVISSRRFSYKDV 35
           +  CL+ A++ +L SPK   Q +K V+S+R+ S +D+
Sbjct: 104 QTQCLAIAVVSKLSSPKSVTQLLKEVVSTRKNSVRDL 140


>ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
           gi|4335729|gb|AAD17407.1| putative salt-inducible
           protein [Arabidopsis thaliana]
           gi|330251331|gb|AEC06425.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/97 (37%), Positives = 61/97 (62%)
 Frame = -2

Query: 325 PPVTPQSLHKSISCSQWHFIEQISDTLTPTTISSALYNLRASPALVLKFTEYLNQSNTDV 146
           PP+T + L +SI  SQWH +E ++D LTP+ +S+ L +L  +P L   F  +++    D 
Sbjct: 43  PPITSEILLESIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDF 102

Query: 145 ECYCLSFAIICQLPSPKLSIQFIKTVISSRRFSYKDV 35
           +  CL+ A+I +L SPK   Q +K V++SR+ S +++
Sbjct: 103 QTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNL 139


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