BLASTX nr result

ID: Atractylodes21_contig00051314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051314
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   4e-15
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   4e-15
gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...    62   2e-14
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   2e-14
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   2e-13

>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 67.0 bits (162), Expect(2) = 4e-15
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +2

Query: 161 NMGRAASWNPVIYKFKTKLSSWTGRLLSMGGRLTLVKSVLGSVLLYYFSLFRAP 322
           N+ R A W+P+I K + KL+SW GR+LS+ GR+TL+K+ + S+ LYY SLF AP
Sbjct: 754 NISRLAHWDPIIKKIEGKLASWKGRMLSIAGRITLIKASISSLPLYYMSLFPAP 807



 Score = 38.9 bits (89), Expect(2) = 4e-15
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LSCFQMASGLRINM-RSTLYVVEVSNEDVVDLAGYLNCNVGRTPFYYLG 144
           L  FQ+ASGL++N  +S++  + V    + + A  L C VGR PF YLG
Sbjct: 700 LILFQLASGLQVNFHKSSIMGIHVDEIWLQEAANALLCKVGRLPFTYLG 748


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 63.9 bits (154), Expect(2) = 4e-15
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = +2

Query: 161 NMGRAASWNPVIYKFKTKLSSWTGRLLSMGGRLTLVKSVLGSVLLYYFSLFRAPLLVL 334
           N+ R + W+PVI K + KL+SW   LLS+GGRLTL+K+ L ++ LYY SLF  P  VL
Sbjct: 754 NITRLSLWDPVISKLEKKLASWKSNLLSIGGRLTLIKACLSNLPLYYMSLFPIPKGVL 811



 Score = 42.0 bits (97), Expect(2) = 4e-15
 Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LSCFQMASGLRINM-RSTLYVVEVSNEDVVDLAGYLNCNVGRTPFYYLG 144
           L  FQ+ASGL++N  +S+L  V V    + D A +L C VG+ PF YLG
Sbjct: 700 LILFQLASGLQVNFHKSSLLGVNVHENLLNDFAKHLLCKVGKLPFTYLG 748


>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score = 62.4 bits (150), Expect(2) = 2e-14
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = +2

Query: 161 NMGRAASWNPVIYKFKTKLSSWTGRLLSMGGRLTLVKSVLGSVLLYYFSLFRAP 322
           N  R + W PV+++ K++LSSW  R LS GGRL LVKSVL ++ +Y  S F+AP
Sbjct: 166 NPRRLSFWEPVVHRIKSRLSSWQSRFLSFGGRLILVKSVLSALPVYALSFFKAP 219



 Score = 41.6 bits (96), Expect(2) = 2e-14
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LSCFQMASGLRINMRSTLYV-VEVSNEDVVDLAGYLNCNVGRTPFYYLG 144
           L  F+  SGL+IN   +L V V V++  + + A  LNC VG  PF YLG
Sbjct: 112 LILFEAVSGLKINFHKSLLVGVNVADSWLTEAASLLNCKVGSLPFTYLG 160


>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 65.9 bits (159), Expect(2) = 2e-14
 Identities = 29/54 (53%), Positives = 40/54 (74%)
 Frame = +2

Query: 161 NMGRAASWNPVIYKFKTKLSSWTGRLLSMGGRLTLVKSVLGSVLLYYFSLFRAP 322
           N  R  +W+P+I K + KL+SW G+LLS+GGRLTL+K+ L ++ LYY SLF  P
Sbjct: 755 NPARIRTWDPIIDKLEKKLASWKGKLLSLGGRLTLIKASLSNLPLYYMSLFPVP 808



 Score = 37.7 bits (86), Expect(2) = 2e-14
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LSCFQMASGLRINM-RSTLYVVEVSNEDVVDLAGYLNCNVGRTPFYYLG 144
           L  FQ+ SGL++N  +S+L  + V++  + + A  L C +G  PF YLG
Sbjct: 701 LIIFQLVSGLQVNFHKSSLMGLNVTSSWIQEAANSLMCKIGTIPFSYLG 749


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 61.6 bits (148), Expect(2) = 2e-13
 Identities = 27/55 (49%), Positives = 38/55 (69%)
 Frame = +2

Query: 170 RAASWNPVIYKFKTKLSSWTGRLLSMGGRLTLVKSVLGSVLLYYFSLFRAPLLVL 334
           R  +W P++ +   KL SW GRLLS+GGR+TL+KS + S+ LY+ SLF  P  V+
Sbjct: 757 RIKTWEPILERISKKLDSWKGRLLSIGGRVTLIKSSISSLPLYFMSLFPIPRSVI 811



 Score = 38.9 bits (89), Expect(2) = 2e-13
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LSCFQMASGLRINM-RSTLYVVEVSNEDVVDLAGYLNCNVGRTPFYYLG 144
           L  F +ASGL+IN  +S+L  + VSN+ + D    L C  G  PF YLG
Sbjct: 700 LILFHLASGLQINFHKSSLIGINVSNQWMKDATASLLCKGGSLPFNYLG 748


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