BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051292
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]    73   5e-20
gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subc...    69   6e-16
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc...    62   2e-12
gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sa...    61   2e-12
gb|EEE65611.1| hypothetical protein OsJ_21159 [Oryza sativa Japo...    54   4e-12

>emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]
          Length = 1012

 Score = 72.8 bits (177), Expect(2) = 5e-20
 Identities = 31/62 (50%), Positives = 49/62 (79%)
 Frame = +1

Query: 220 KGFHTIRKLERNQRTVKVGNGDDLNVEAVGTLPLLLEGGFCMNLYDTLYVPSITRNLVSV 399
           +G+ T +KL + +RT+ +GNG ++ +EA+G+L L+L+ GF M+L DT+YVP  TRNL+SV
Sbjct: 274 QGYLTSKKLSKGERTITLGNGIEVEIEAIGSLHLILDIGFIMDLVDTIYVPVFTRNLISV 333

Query: 400 PK 405
           P+
Sbjct: 334 PR 335



 Score = 49.7 bits (117), Expect(2) = 5e-20
 Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   KIEKPDVAHVTTTNSAKRKSKSQEGENSKVQXXXXXXXXXXXXXXXXXRCKFCHKK*HFQ 182
           K+EKPD+AH+T   + K+  K  +G+  K                   +C FCHKK H  
Sbjct: 183 KVEKPDMAHLTMGPN-KKSFKKGKGKKKK---QGNDVSHNGQKEENKIQCHFCHKKGHKI 238

Query: 183 RDCPKFKEWLAKK-GIPYN 236
           RDC  FK WL KK  IP N
Sbjct: 239 RDCSGFKAWLEKKVDIPPN 257


>gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 815

 Score = 68.9 bits (167), Expect(2) = 6e-16
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = +1

Query: 220 KGFHTIRKLERNQRTVKVGNGDDLNVEAVGTLPLLLEGGFCMNLYDTLYVPSITRNLVSV 399
           +GFHT R L R +R ++V NG +  VEA+G  PL L  GF + L++ LYVPS++RNLVSV
Sbjct: 263 QGFHTRRMLARGERCIRVANGVEAEVEAIGEYPLKLNNGFTLYLHNVLYVPSLSRNLVSV 322



 Score = 39.7 bits (91), Expect(2) = 6e-16
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 51  KRKSKSQEGENSKVQXXXXXXXXXXXXXXXXXRCKFCHKK*HFQRDCPKFKEWLAKKG 224
           KR + SQ   + K +                  C++C +K HFQ+DCP+F + L KKG
Sbjct: 196 KRNNHSQNVASPKARGKAPQVDPNPRQEVERDACRWCKQKGHFQKDCPEFLKHLLKKG 253


>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1407

 Score = 61.6 bits (148), Expect(2) = 2e-12
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = +1

Query: 220 KGFHTIRKLERNQRTVKVGNGDDLNVEAVGTLPLLLEGGFCMNLYDTLYVPSITRNLVSV 399
           +GF   R L+R +R ++V NG +  VEA+G   L L  GF + L+D LYVPS+ RNLVSV
Sbjct: 336 QGFAMRRTLKRGERRIRVANGVETEVEAIGDFTLTLHTGFKLQLHDVLYVPSMKRNLVSV 395

Query: 400 PK 405
            +
Sbjct: 396 SR 397



 Score = 35.4 bits (80), Expect(2) = 2e-12
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 150 CKFCHKK*HFQRDCPKFKEWLAKKG 224
           C FC K  H Q+DC  F  WL+KKG
Sbjct: 277 CYFCGKSGHRQKDCIGFMRWLSKKG 301


>gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|21321753|gb|AAM47288.1|AC122146_7 Putative gag-pol
           polyprotein [Oryza sativa Japonica Group]
           gi|31430568|gb|AAP52462.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1225

 Score = 61.2 bits (147), Expect(2) = 2e-12
 Identities = 30/62 (48%), Positives = 40/62 (64%)
 Frame = +1

Query: 220 KGFHTIRKLERNQRTVKVGNGDDLNVEAVGTLPLLLEGGFCMNLYDTLYVPSITRNLVSV 399
           +GF   R L R +R ++V NG +  VEA+G   L L  GF + L+D LYVPS+ RNLVSV
Sbjct: 336 QGFAMRRTLRRGERRIRVANGVETEVEAIGDFTLTLHTGFKLQLHDVLYVPSMKRNLVSV 395

Query: 400 PK 405
            +
Sbjct: 396 SR 397



 Score = 35.4 bits (80), Expect(2) = 2e-12
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 150 CKFCHKK*HFQRDCPKFKEWLAKKG 224
           C FC K  H Q+DC  F  WL+KKG
Sbjct: 277 CYFCGKSGHRQKDCIGFMRWLSKKG 301


>gb|EEE65611.1| hypothetical protein OsJ_21159 [Oryza sativa Japonica Group]
          Length = 345

 Score = 53.5 bits (127), Expect(2) = 4e-12
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +1

Query: 220 KGFHTIRKLERNQRTVKVGNGDDLNVEAVGTLPLLLEGGFCMNLYDTLYVPSITRNLVSV 399
           +GF ++R L + +R ++V +G ++ V AVG L L L  G  + L+D LY PS+ RNL+SV
Sbjct: 256 QGFLSMRTLRKGERILRVADGAEIKVMAVGELHLRLPSGNNLLLHDVLYAPSVKRNLISV 315



 Score = 42.4 bits (98), Expect(2) = 4e-12
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   KIEKPDVAHVTTTNSA-KRKSKSQEGENSKVQXXXXXXXXXXXXXXXXXRCKFCHKK*HF 179
           K +KP+      +N A K K++   G+NS  +                  CKFC  + H 
Sbjct: 161 KKKKPNTPSTQASNGAHKGKAQVPAGQNSAGKFL----------------CKFCKAEGHA 204

Query: 180 QRDCPKFKEWLAKKG 224
           QRDC  F+ WLAKKG
Sbjct: 205 QRDCEGFRAWLAKKG 219