BLASTX nr result

ID: Atractylodes21_contig00051271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051271
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    60   2e-07
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    60   2e-07
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    59   4e-07
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    57   1e-06
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]    57   2e-06

>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -2

Query: 300 DKFEIRGRPGIFMSYPSGTKGYKVYDPSHDKIVISRDVKFAEKLFPY-RNKGSEPEEDIF 124
           DKF  R R  IF+ YP G KG+KVYD S ++ ++SRDV F E +FPY  N+G    + I+
Sbjct: 749 DKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEG----DTIY 804

Query: 123 KYPQTKEGSFDDD 85
             P T   ++D+D
Sbjct: 805 TPPVTCPITYDED 817


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -2

Query: 300 DKFEIRGRPGIFMSYPSGTKGYKVYDPSHDKIVISRDVKFAEKLFPY-RNKGSEPEEDIF 124
           DKF  R R  IF+ YP G KG+KVYD S ++ ++SRDV F E +FPY  N+G    + I+
Sbjct: 749 DKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEG----DTIY 804

Query: 123 KYPQTKEGSFDDD 85
             P T   ++D+D
Sbjct: 805 TPPVTCPITYDED 817


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/61 (49%), Positives = 37/61 (60%)
 Frame = -2

Query: 297 KFEIRGRPGIFMSYPSGTKGYKVYDPSHDKIVISRDVKFAEKLFPYRNKGSEPEEDIFKY 118
           KFE R R   F+ YPSG KGYK+ D     I ISR+V F E LFP++ K +E EE    +
Sbjct: 772 KFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDLFPFKTKPAENEESSVFF 831

Query: 117 P 115
           P
Sbjct: 832 P 832


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
 Frame = -2

Query: 297 KFEIRGRPGIFMSYPSGTKGYKVYDPSHDKIVISRDVKFAEKLFPYRN--KGSEPEEDIF 124
           KF+ R    +F+ YP G KGYKVY     K +ISRDV F E  FPY+N    + P  D F
Sbjct: 767 KFDPRSIESVFIGYPHGQKGYKVYSLKDKKXLISRDVTFFETEFPYQNXLSTTSPSLDTF 826

Query: 123 --KYPQTKEGSFDDD 85
               PQT +   DDD
Sbjct: 827 FPSLPQTPD--IDDD 839


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/46 (54%), Positives = 31/46 (67%)
 Frame = -2

Query: 297 KFEIRGRPGIFMSYPSGTKGYKVYDPSHDKIVISRDVKFAEKLFPY 160
           KF+ R  P IF+ YP G K YK++D S  K+  SRDVKF E +FPY
Sbjct: 605 KFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFPY 650


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