BLASTX nr result

ID: Atractylodes21_contig00051254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051254
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis ...   108   3e-22
emb|CBI30368.3| unnamed protein product [Vitis vinifera]              108   3e-22
emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]   108   3e-22
ref|XP_002322797.1| transcription factor E2F [Populus trichocarp...    94   2e-17
gb|AEB96141.1| E2F protein [Cocos nucifera]                            90   2e-16

>ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis vinifera]
          Length = 498

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = +2

Query: 8   PMRRHLSLYSTKPPFIPSDDYHRFSSGNDGKRVVITADQEAEVIIVRSPPVKRKLVTSYN 187
           PM+RHL   STKPPF+P DDYHRFSS  D   V   A+ E E I+V+SP +KRK     N
Sbjct: 23  PMKRHLPFTSTKPPFVPPDDYHRFSSA-DAHGV---ANHEPEGIVVKSPQLKRKSAMDDN 78

Query: 188 EVASNEW-ASPGHASTVNSPVRTPVSGKGGRVNGRSK 295
           EV S+EW ASPG+A   NSP RTPVSGKGGR+  +SK
Sbjct: 79  EVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSK 115


>emb|CBI30368.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = +2

Query: 8   PMRRHLSLYSTKPPFIPSDDYHRFSSGNDGKRVVITADQEAEVIIVRSPPVKRKLVTSYN 187
           PM+RHL   STKPPF+P DDYHRFSS  D   V   A+ E E I+V+SP +KRK     N
Sbjct: 23  PMKRHLPFTSTKPPFVPPDDYHRFSSA-DAHGV---ANHEPEGIVVKSPQLKRKSAMDDN 78

Query: 188 EVASNEW-ASPGHASTVNSPVRTPVSGKGGRVNGRSK 295
           EV S+EW ASPG+A   NSP RTPVSGKGGR+  +SK
Sbjct: 79  EVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSK 115


>emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]
          Length = 735

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = +2

Query: 8   PMRRHLSLYSTKPPFIPSDDYHRFSSGNDGKRVVITADQEAEVIIVRSPPVKRKLVTSYN 187
           PM+RHL   STKPPF+P DDYHRFSS  D   V   A+ E E I+V+SP +KRK     N
Sbjct: 23  PMKRHLPFTSTKPPFVPPDDYHRFSSA-DAHGV---ANHEPEGIVVKSPQLKRKSAMDDN 78

Query: 188 EVASNEW-ASPGHASTVNSPVRTPVSGKGGRVNGRSK 295
           EV S+EW ASPG+A   NSP RTPVSGKGGR+  +SK
Sbjct: 79  EVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSK 115


>ref|XP_002322797.1| transcription factor E2F [Populus trichocarpa]
           gi|222867427|gb|EEF04558.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 445

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
 Frame = +2

Query: 8   PMRRHLSLYSTKPPFIPSDDYHRFSSGNDGKRVVITADQEAEVIIVRSPPVKRKLVTSYN 187
           P+ RHL+  + KPPF+P DDYHRFSS +  +   + AD++AE I+VRSP +KRK   + N
Sbjct: 24  PLARHLAFATMKPPFLPPDDYHRFSSPSTSR---VAADRDAEAIVVRSPRLKRKSGLADN 80

Query: 188 EV-ASNEWASPGHASTVNSPVRTPVSGKGGRVNGRSK 295
            V +SN  +SPG ++  NSP RTP S KGGR    SK
Sbjct: 81  GVSSSNHVSSPGCSNISNSPFRTPASAKGGRTYNNSK 117


>gb|AEB96141.1| E2F protein [Cocos nucifera]
          Length = 471

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/98 (51%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
 Frame = +2

Query: 8   PMRRHLSLYSTKPPFIPSDDYHRFSSGNDGKRVVITADQEAEVIIVRSPPVKRKLVTSYN 187
           P++RH    S KPPF+  D+YHRFS+  DG+R  IT D  ++ +++++P +KRK     N
Sbjct: 22  PLKRHPLFPSAKPPFVAPDEYHRFSAA-DGRR--ITPDDVSDALVIKTP-LKRKPEQEDN 77

Query: 188 EVA-SNEWA-SPGHASTVNSPVRTPVSGKGGRVNGRSK 295
           E A S+EW  SPG+A  V SP+ TPVSGKGGR +GRSK
Sbjct: 78  EAAESSEWTNSPGYAEAVTSPLLTPVSGKGGRNHGRSK 115


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