BLASTX nr result

ID: Atractylodes21_contig00051230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051230
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...    63   3e-08
ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    59   4e-07

>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 532

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = -1

Query: 320 WNWRRDIRDGRERDQLESLINSLPSHFSNDDRDGWSWKLEKKSYFSVAQVREYI--DNKY 147
           W WRR +    E    E  +         +  D WSW L+  + +SV +   +I    +Y
Sbjct: 294 WVWRRGLLAWEEDSVRECTLLLHNVVLQVNVPDKWSWLLDPINGYSVRESYRHITTSGEY 353

Query: 146 LSFTVNNNYWNNWVPKKINLFVWRLVRNGIPTNVNLFGRGVDV-NFVSC 3
           +  +V ++ W+ ++P+K++LFVWRL+RN +PT  NL  R + + N V C
Sbjct: 354 VDQSVVDDVWHRYIPQKVSLFVWRLLRNRLPTKDNLMRRRIILANVVDC 402


>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
 Frame = -1

Query: 320  WNWRRDIRDGRERDQLESLINSLPSHFSNDDRDGWSWKLEKKSYFSVAQVREYI--DNKY 147
            W WRR +    E    E  +         +  D W W L+    +SV +   +I     +
Sbjct: 1525 WVWRRRLLAWEEESVRECSLLLHNFVLQVNIFDKWRWTLDTVHGYSVREAYRFIVSHGDH 1584

Query: 146  LSFTVNNNYWNNWVPKKINLFVWRLVRNGIPTNVNLFGRGV-DVNFVSC 3
            L  +  +  W+N++P K++LFVWRL+RN +PT  NL  R +   N V C
Sbjct: 1585 LDRSSVDKVWHNYIPSKVSLFVWRLLRNRLPTRGNLLRRNILHANNVMC 1633


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