BLASTX nr result

ID: Atractylodes21_contig00051229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051229
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    77   1e-12
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...    75   7e-12
ref|XP_002317947.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H...    72   4e-11
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    72   4e-11

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/86 (39%), Positives = 54/86 (62%)
 Frame = +2

Query: 2   LKNANIRIREIDSAAHSSYSCFCPSWLKVLLKAFYFLNIYCTFLQVQQKKVTLPSLEGGL 181
           L+   +   +   +   S  C CP+WLK ++K F FLNI+  FLQ+QQ  +TL  L+ GL
Sbjct: 199 LREVGLAYGDATQSGSKSSLCLCPAWLKKIMKTFTFLNIFSAFLQLQQGHITLIHLKEGL 258

Query: 182 NQLRKFGLGFEYADLENLAVLCPQVI 259
           + L +FG   +  D+E+L+VLCP+++
Sbjct: 259 DHLGEFGFQVDMEDIEHLSVLCPKLV 284


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/74 (41%), Positives = 50/74 (67%)
 Frame = +2

Query: 62  CFCPSWLKVLLKAFYFLNIYCTFLQVQQKKVTLPSLEGGLNQLRKFGLGFEYADLENLAV 241
           C CP WLK  ++AF FLNI   +LQ+ ++++T   L+  L QL +FG    + D+E++++
Sbjct: 202 CLCPEWLKRTMQAFAFLNILSAYLQMHKEEITSAHLKEVLKQLGRFGFNAGFEDIEHISI 261

Query: 242 LCPQVIRFIDNGTE 283
           LCP+V+ F +N TE
Sbjct: 262 LCPKVVSFANNSTE 275


>ref|XP_002317947.1| predicted protein [Populus trichocarpa] gi|222858620|gb|EEE96167.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/67 (50%), Positives = 49/67 (73%)
 Frame = +2

Query: 59  SCFCPSWLKVLLKAFYFLNIYCTFLQVQQKKVTLPSLEGGLNQLRKFGLGFEYADLENLA 238
           SCFCP+WLK +++AF FLNI+  FLQ+Q++++T  SL+  L  L K GL   + D+E L+
Sbjct: 191 SCFCPAWLKRIMQAFAFLNIFTAFLQMQRREITSDSLKDALKNLAKSGLKAGFEDIELLS 250

Query: 239 VLCPQVI 259
           VL P+VI
Sbjct: 251 VLYPKVI 257


>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
           [Cucumis sativus]
          Length = 489

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/78 (43%), Positives = 49/78 (62%)
 Frame = +2

Query: 59  SCFCPSWLKVLLKAFYFLNIYCTFLQVQQKKVTLPSLEGGLNQLRKFGLGFEYADLENLA 238
           SC CP WLK ++KAF FLN++  FLQ+Q++ +T+  LE   +QL+K  L F   D+ NL+
Sbjct: 245 SCICPIWLKKIMKAFSFLNVFSMFLQLQEEIMTVSRLEQATDQLQKRRLMFCMEDIHNLS 304

Query: 239 VLCPQVIRFIDNGTEGRR 292
            LCP+ + F     E  R
Sbjct: 305 RLCPKAVHFASGRLEDTR 322


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/78 (43%), Positives = 49/78 (62%)
 Frame = +2

Query: 59  SCFCPSWLKVLLKAFYFLNIYCTFLQVQQKKVTLPSLEGGLNQLRKFGLGFEYADLENLA 238
           SC CP WLK ++KAF FLN++  FLQ+Q++ +T+  LE   +QL+K  L F   D+ NL+
Sbjct: 245 SCICPIWLKKIMKAFSFLNVFSMFLQLQEEIMTVSRLEQATDQLQKRRLMFCMEDIHNLS 304

Query: 239 VLCPQVIRFIDNGTEGRR 292
            LCP+ + F     E  R
Sbjct: 305 RLCPKAVHFASGRLEDTR 322


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