BLASTX nr result

ID: Atractylodes21_contig00051195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051195
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]      68   7e-10
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  68   9e-10
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  65   6e-09
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
gb|AAD17351.1| contains similarity to retrovirus-related polypro...    60   2e-07

>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/66 (40%), Positives = 48/66 (72%)
 Frame = +1

Query: 127 QVKIRSWRNLKKLLKERFLPNSYKQDLYVKMTNFKQGNLNIDDYTHEFEQLMLQSGIQEK 306
           Q  +RSW  +K+ ++ RF+P  Y++DL+ K+ N KQG+L++D+Y  E E+ M+++ + E 
Sbjct: 205 QGDVRSWAEMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYED 264

Query: 307 QEQTIA 324
           +EQ+IA
Sbjct: 265 EEQSIA 270


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/63 (47%), Positives = 41/63 (65%)
 Frame = +1

Query: 136 IRSWRNLKKLLKERFLPNSYKQDLYVKMTNFKQGNLNIDDYTHEFEQLMLQSGIQEKQEQ 315
           I+SW  LKK L E+F+P  Y QD+++K+T  KQ    ++ Y  +FEQL LQ  + EK EQ
Sbjct: 156 IKSWLKLKKKLNEKFIPKEYTQDIFIKLTQLKQDQQPLESYLRDFEQLTLQCELNEKPEQ 215

Query: 316 TIA 324
            IA
Sbjct: 216 KIA 218


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = +1

Query: 136 IRSWRNLKKLLKERFLPNSYKQDLYVKMTNFKQGNLNIDDYTHEFEQLMLQSGIQEKQEQ 315
           +RSW  LKK +  +F+   Y QDL++K++N KQ    ++ Y  EFEQL LQ  I EK EQ
Sbjct: 158 LRSWSKLKKKMLAKFVTKDYTQDLFIKLSNLKQKEKTVEAYLREFEQLTLQCEINEKSEQ 217

Query: 316 TIA 324
            IA
Sbjct: 218 RIA 220


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/63 (41%), Positives = 40/63 (63%)
 Frame = +1

Query: 133 KIRSWRNLKKLLKERFLPNSYKQDLYVKMTNFKQGNLNIDDYTHEFEQLMLQSGIQEKQE 312
           KI  W  +KK ++  FLP +Y + LY ++ N +QGN ++DDYT EF QL+ +  I E +E
Sbjct: 154 KITCWDKMKKNMRSAFLPYNYTRTLYQRLQNLRQGNRSVDDYTTEFYQLVSRDAIAEDEE 213

Query: 313 QTI 321
             +
Sbjct: 214 SRV 216


>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
           zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
           E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
           putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/63 (38%), Positives = 43/63 (68%)
 Frame = +1

Query: 136 IRSWRNLKKLLKERFLPNSYKQDLYVKMTNFKQGNLNIDDYTHEFEQLMLQSGIQEKQEQ 315
           I +W  LK ++K RF+P+ Y ++L+ ++ N  QGN  +++Y  E E LML++ +QE+ E 
Sbjct: 126 IETWNQLKNIMKRRFVPSHYHRELHQRLRNLVQGNRTVEEYFKEMETLMLRADVQEECEA 185

Query: 316 TIA 324
           T++
Sbjct: 186 TMS 188


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