BLASTX nr result
ID: Atractylodes21_contig00051164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00051164
(397 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2... 193 1e-47
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi... 186 2e-45
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi... 181 4e-44
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 181 6e-44
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,... 168 4e-40
>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
predicted protein [Populus trichocarpa]
Length = 621
Score = 193 bits (491), Expect = 1e-47
Identities = 95/132 (71%), Positives = 109/132 (82%)
Frame = +2
Query: 2 DEISYGSIISGYMLHGFVDKAMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEMQ 181
DE++YG+IISGYM HG VDK M LFREM+ LSTWNAVISG QN ++E VVDL EMQ
Sbjct: 291 DEVTYGAIISGYMAHGVVDKGMELFREMKSRVLSTWNAVISGLVQNNRHEGVVDLVREMQ 350
Query: 182 VYGFRPNTLTLSNILPTLSHLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLD 361
GFRPN +TLS++LPTLS+ SNLKGGKEIH YA++N YDRNIYVATAIIDTYAKLGFL
Sbjct: 351 GLGFRPNAVTLSSVLPTLSYFSNLKGGKEIHGYAVKNGYDRNIYVATAIIDTYAKLGFLF 410
Query: 362 EAQIAFDQSEKR 397
AQ FDQS++R
Sbjct: 411 GAQYVFDQSKER 422
Score = 70.1 bits (170), Expect = 2e-10
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Frame = +2
Query: 20 SIISGYMLHGFVDKAMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEMQVY-GFR 196
++IS Y V A LF +M + TWN++I+G Q ++ +L+ EM GF+
Sbjct: 164 ALISFYSKCLGVGFARKLFDKMRERDVVTWNSMIAGYAQAGFFKECKELYREMGALPGFK 223
Query: 197 PNTLTLSNILPTLSHLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLDEAQIA 376
PN +T+ ++L +L G E+H Y + N + ++ V A+I YAK G LD A+
Sbjct: 224 PNAVTVLSVLQACMQSQDLVFGMEVHRYIVDNKVELDVLVCNALIGLYAKCGSLDYAREL 283
Query: 377 FDQ-SEK 394
FD+ SEK
Sbjct: 284 FDEMSEK 290
>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 186 bits (472), Expect = 2e-45
Identities = 93/132 (70%), Positives = 105/132 (79%)
Frame = +2
Query: 2 DEISYGSIISGYMLHGFVDKAMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEMQ 181
DE++YGSI+SGYM HGFVDKAM LFREM+ P LSTWNAVISG QN E +++L EMQ
Sbjct: 306 DEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQ 365
Query: 182 VYGFRPNTLTLSNILPTLSHLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLD 361
+GFRPN +TLS+ILPT S SNLKGGK IHAYAIRN Y NIYVAT+IID YAKLGFL
Sbjct: 366 EFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLR 425
Query: 362 EAQIAFDQSEKR 397
AQ FDQS+ R
Sbjct: 426 GAQWVFDQSKDR 437
Score = 60.8 bits (146), Expect = 1e-07
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 62 AMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEM-QVYGFRPNTLTLSNILPTLS 238
A ILF M + +WN++I+G Q YE +L+ +M G RPN +T+ ++L +
Sbjct: 193 ARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACA 252
Query: 239 HLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLDEAQIAFDQSEKR 397
++L G ++H + I + ++ ++I YAK G LD A+ F++ +
Sbjct: 253 QTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNK 305
>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 181 bits (460), Expect = 4e-44
Identities = 89/132 (67%), Positives = 105/132 (79%)
Frame = +2
Query: 2 DEISYGSIISGYMLHGFVDKAMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEMQ 181
D I+Y S+ISGYM+HGFV++AM LFRE ERP L TWNAVISG QN + E VD+F MQ
Sbjct: 275 DAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQ 334
Query: 182 VYGFRPNTLTLSNILPTLSHLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLD 361
+G RPNT+TL++ILP SH S LKGGKEIH YAIRN+YDRNIYVATAIID+YAK G+L
Sbjct: 335 SHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLH 394
Query: 362 EAQIAFDQSEKR 397
AQ+ FDQ + R
Sbjct: 395 GAQLVFDQIKGR 406
Score = 58.2 bits (139), Expect = 7e-07
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 62 AMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEM-QVYGFRPNTLTLSNILPTLS 238
A I+F M + +WNA+++G Q YE +LF M +PN LT ++L +
Sbjct: 162 ARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACA 221
Query: 239 HLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLDEAQIAFDQ 385
++L G E+H + + ++ + A+I YAK G LD A+ F++
Sbjct: 222 QSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEE 270
>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 181 bits (459), Expect = 6e-44
Identities = 89/132 (67%), Positives = 105/132 (79%)
Frame = +2
Query: 2 DEISYGSIISGYMLHGFVDKAMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEMQ 181
D I+Y S+ISGYM+HGFV++AM LFRE ERP L TWNAVISG QN + E VD+F MQ
Sbjct: 275 DGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQ 334
Query: 182 VYGFRPNTLTLSNILPTLSHLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLD 361
+G RPNT+TL++ILP SH S LKGGKEIH YAIRN+YDRNIYVATAIID+YAK G+L
Sbjct: 335 SHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLH 394
Query: 362 EAQIAFDQSEKR 397
AQ+ FDQ + R
Sbjct: 395 GAQLVFDQIKGR 406
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +2
Query: 62 AMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEM-QVYGFRPNTLTLSNILPTLS 238
A I+F M +WNA+++G Q YE +LF M +PN LT ++L +
Sbjct: 162 ARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACA 221
Query: 239 HLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLDEAQIAFDQSEKR 397
++L G E+H + + ++ + A+I YAK G LD A+ F++ ++
Sbjct: 222 QSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEK 274
>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 168 bits (426), Expect = 4e-40
Identities = 82/132 (62%), Positives = 105/132 (79%)
Frame = +2
Query: 2 DEISYGSIISGYMLHGFVDKAMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEMQ 181
DE++YG+IISG MLHG+VD+++ LFR M+ LSTWNAVI+G QN ++E V+DL EMQ
Sbjct: 293 DEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQ 352
Query: 182 VYGFRPNTLTLSNILPTLSHLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLD 361
GFRPN +TLS++L T+++ S+LKGGKEIH+YAI+ Y RNIYVATAIID YAK G+L
Sbjct: 353 ALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLR 412
Query: 362 EAQIAFDQSEKR 397
AQ FDQS+ R
Sbjct: 413 GAQRVFDQSKDR 424
Score = 71.2 bits (173), Expect = 8e-11
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Frame = +2
Query: 53 VDKAMILFREMERPALSTWNAVISGQFQNKQYEMVVDLFHEMQVY-GFRPNTLTLSNILP 229
+D + +F M + + +WN++ISG Q YE L+ EM + GFRPN +T+ ++L
Sbjct: 177 LDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQ 236
Query: 230 TLSHLSNLKGGKEIHAYAIRNSYDRNIYVATAIIDTYAKLGFLDEAQIAFDQ-SEK 394
+L G E+H + + N + +I V A+I YAK G LD A+ FD+ SEK
Sbjct: 237 ACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEK 292