BLASTX nr result

ID: Atractylodes21_contig00051089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051089
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    56   3e-06
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       55   6e-06

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = -3

Query: 141 LHMIFIDLEKAYDSVTRDLI*RCLKDRGMPQMYVRAIQDMY 19
           LHM+FIDLEKAYD V+RD+I R L+ +G+   Y++AI+DMY
Sbjct: 302 LHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMY 342


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -3

Query: 141 LHMIFIDLEKAYDSVTRDLI*RCLKDRGMPQMYVRAIQDMYGK 13
           LH+IFIDLEKAYD V R+++ + L+ +G+   Y+RAIQDMY +
Sbjct: 27  LHLIFIDLEKAYDRVPREILWKALEKKGVRVAYIRAIQDMYDR 69


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