BLASTX nr result

ID: Atractylodes21_contig00051036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051036
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275356.1| PREDICTED: F-box protein At4g18380 [Vitis vi...    87   2e-15
ref|XP_002313372.1| f-box family protein [Populus trichocarpa] g...    82   3e-14
ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vit...    78   7e-13
ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cuc...    74   1e-11
ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cuc...    74   1e-11

>ref|XP_002275356.1| PREDICTED: F-box protein At4g18380 [Vitis vinifera]
           gi|296083830|emb|CBI24218.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
 Frame = +3

Query: 6   IQMTERQVVELREDMNSTTAAVVEPDRTKIPAVTIKMWYVPVLELPESGCVMRGATLAVI 185
           ++M E Q  ELR+ +N+        +RTK+PA+ IK+WYVP+LELP SGCVM+GATL VI
Sbjct: 237 LRMGEDQFKELRKCVNTRPPL----ERTKLPAICIKLWYVPLLELPASGCVMKGATLIVI 292

Query: 186 RPAVTAVEKDDDVSLAMGAF-GE---KCMGEAVRKLIQRKKSY 302
           RP    ++   D  L  GAF GE   + + EAVR++++ KK Y
Sbjct: 293 RPLNQVMKMKSDGDLLAGAFDGEEEAEALCEAVREILKEKKPY 335


>ref|XP_002313372.1| f-box family protein [Populus trichocarpa]
           gi|222849780|gb|EEE87327.1| f-box family protein
           [Populus trichocarpa]
          Length = 361

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
 Frame = +3

Query: 12  MTERQVVELREDMNSTTAAVVEP-DRTKIPAVTIKMWYVPVLELPESGCVMRGATLAVIR 188
           M + +V E+R  M S  A+     +RT++P +++K+WYVPVLELPE+G +MRGATLAV+R
Sbjct: 253 MGKDEVAEIRNSMKSMVASTDSSLERTRVPDLSMKLWYVPVLELPENGYIMRGATLAVLR 312

Query: 189 PAVTAVEKDDDVSLAMGAFGEKC----MGEAVRKLIQRKKSY 302
           P       +   S   G  GE+C      EAVR++++ KKSY
Sbjct: 313 PNDDGQIGNGSKSDLFGFDGEECEKKAFNEAVREMVKMKKSY 354


>ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vitis vinifera]
          Length = 341

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
 Frame = +3

Query: 12  MTERQVVELREDMNSTTAAVVEPDRTKIPAVTIKMWYVPVLELPESGCVMRGATLAVIRP 191
           M E Q  ELR  MN T       +RT +PAV +K+W+VPVLELP SG VM GATL VIRP
Sbjct: 238 MGEEQFKELRRSMNPTAPV----ERTMVPAVRVKLWHVPVLELPASGRVMNGATLIVIRP 293

Query: 192 AVTAVE-KDDDVSLA---MGAFGEKCMGEAVRKLIQRKKSY 302
           A   ++ + +D  L     G   E+ + EAVR++++ KK Y
Sbjct: 294 AERTMKMESEDEGLGDCFEGEEEEEDLREAVREMLKEKKPY 334


>ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
          Length = 354

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/102 (43%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
 Frame = +3

Query: 12  MTERQVVELREDMNSTTAAVVEPDRTKIPAVTIKMWYVPVLELPESGCVMRGATLAVIRP 191
           M E +V+ELRE M  ++++ VE  R+ IP + +KMWYVPVL+LPE+G VM  ATL VI+P
Sbjct: 248 MEEEEVMELRESMQLSSSSYVE--RSVIPDLKMKMWYVPVLDLPEAGFVMTAATLVVIKP 305

Query: 192 A-----VTAVEKDDDVSLAMGAFGEKCMGEAVRKLIQRKKSY 302
           +     +  +E+  D   +         GEAVRKL++ K++Y
Sbjct: 306 SGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVRKLMKLKRNY 347


>ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
          Length = 354

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/102 (43%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
 Frame = +3

Query: 12  MTERQVVELREDMNSTTAAVVEPDRTKIPAVTIKMWYVPVLELPESGCVMRGATLAVIRP 191
           M E +V+ELRE M  ++++ VE  R+ IP + +KMWYVPVL+LPE+G VM  ATL VI+P
Sbjct: 248 MEEEEVMELRESMQLSSSSYVE--RSVIPDLKMKMWYVPVLDLPEAGFVMTAATLVVIKP 305

Query: 192 A-----VTAVEKDDDVSLAMGAFGEKCMGEAVRKLIQRKKSY 302
           +     +  +E+  D   +         GEAVRKL++ K++Y
Sbjct: 306 SGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVRKLMKLKRNY 347


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