BLASTX nr result

ID: Atractylodes21_contig00051022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051022
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   237   7e-61
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   195   3e-48
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   191   6e-47
gb|ABW74566.1| integrase [Boechera divaricarpa]                       182   2e-44
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   176   2e-42

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  237 bits (605), Expect = 7e-61
 Identities = 115/178 (64%), Positives = 144/178 (80%)
 Frame = +3

Query: 6   GRGRGQYGDEQRHFKCTIQCNH*QKYGHKEADCWSKQRDEKQIQANFTENSEEESRLFMA 185
           GRGR Q G E R +K  IQC + +K+GHKE DCW+KQ+DE++  ANFT+N EEES+LFMA
Sbjct: 242 GRGRNQVG-EFRQYKSNIQCRYCKKFGHKEVDCWTKQKDEQK-DANFTQNVEEESKLFMA 299

Query: 186 QSVTHDPVSGVWFLDSGCSNHMSGTKSLFRELDESQKGEVRLGDDKQMKVEGKGTVAIKT 365
            S   +  + VWF+DSGCSNHMS +KSLFR+LDESQK EVRLGDDKQ+ +EGKGTV IKT
Sbjct: 300 SSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKT 359

Query: 366 IRGDVKLLYDVQFVPNLAYNMLSIGQVMLNGYKVVFDGDACAINDKKSGQTIAIVHMT 539
           ++G+VK LYDVQ+VP LA+N+LS+GQ+M +GY VVF  +AC I DK+SG+TIA V MT
Sbjct: 360 VQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMT 417


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  195 bits (496), Expect = 3e-48
 Identities = 96/184 (52%), Positives = 128/184 (69%), Gaps = 6/184 (3%)
 Frame = +3

Query: 3   RGRGRGQYGDEQRHF------KCTIQCNH*QKYGHKEADCWSKQRDEKQIQANFTENSEE 164
           R RGRG    +QR        K  IQC + +++GH +A+CW K+R EKQ  AN+ E  E+
Sbjct: 216 RXRGRGDAQGDQRQSTEKSRNKSNIQCYYCKRFGHVQAECWKKERQEKQ--ANYVEQEED 273

Query: 165 ESRLFMAQSVTHDPVSGVWFLDSGCSNHMSGTKSLFRELDESQKGEVRLGDDKQMKVEGK 344
           + +LFMA +      + +WFLDSGCSNHM+G KSLF+ELDES K +V+LGDDKQ+ VEGK
Sbjct: 274 QVKLFMAYNEEVVXSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGK 333

Query: 345 GTVAIKTIRGDVKLLYDVQFVPNLAYNMLSIGQVMLNGYKVVFDGDACAINDKKSGQTIA 524
           GTVA+    G+VKLLY+V F+P+L  N+LS+GQ+M++GY ++FDG  C I DKK  Q I 
Sbjct: 334 GTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIV 393

Query: 525 IVHM 536
            V M
Sbjct: 394 DVRM 397


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  191 bits (485), Expect = 6e-47
 Identities = 93/184 (50%), Positives = 127/184 (69%), Gaps = 6/184 (3%)
 Frame = +3

Query: 3   RGRGRG------QYGDEQRHFKCTIQCNH*QKYGHKEADCWSKQRDEKQIQANFTENSEE 164
           RGRGRG      +   E+   K  IQC + +++GH + +CW K+R EKQ  AN+ E  E+
Sbjct: 230 RGRGRGDAQGYQRQSTEKNRNKSNIQCYYCKRFGHVQXECWKKERQEKQ--ANYVEQEED 287

Query: 165 ESRLFMAQSVTHDPVSGVWFLDSGCSNHMSGTKSLFRELDESQKGEVRLGDDKQMKVEGK 344
           + +LFM  +      + +WFLDSGCSNHM+G KSLF+ELDES K +V+LGDDKQ+ VEGK
Sbjct: 288 QVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGK 347

Query: 345 GTVAIKTIRGDVKLLYDVQFVPNLAYNMLSIGQVMLNGYKVVFDGDACAINDKKSGQTIA 524
           G +A+    G+VKLLY+V F+P+L  N+LS+GQ+M++GY ++FDG  C I DKKS Q I 
Sbjct: 348 GIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIV 407

Query: 525 IVHM 536
            V M
Sbjct: 408 NVRM 411


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  182 bits (463), Expect = 2e-44
 Identities = 90/187 (48%), Positives = 129/187 (68%), Gaps = 8/187 (4%)
 Frame = +3

Query: 3   RGRGRGQYGDEQRHF--------KCTIQCNH*QKYGHKEADCWSKQRDEKQIQANFTENS 158
           RG+GRG Y +             K  IQC++ +KYGH + +CW KQ++EK   A F E  
Sbjct: 70  RGKGRGYYDNSSSSNQSYNRGTNKSDIQCHYCKKYGHMQTNCWKKQKEEKH--ACFVEQE 127

Query: 159 EEESRLFMAQSVTHDPVSGVWFLDSGCSNHMSGTKSLFRELDESQKGEVRLGDDKQMKVE 338
            E+ RLFMA   + +    VW+LDSGCSNHM+GTKS F+ELDES K +V+LG+DK+++VE
Sbjct: 128 NEQPRLFMAFE-SEEASKSVWYLDSGCSNHMTGTKSSFKELDESHKLKVKLGNDKEVQVE 186

Query: 339 GKGTVAIKTIRGDVKLLYDVQFVPNLAYNMLSIGQVMLNGYKVVFDGDACAINDKKSGQT 518
           G+G VA+    G++KL+Y V ++P+LA+N+LS+GQ++ N   V+FDG+ C I +KKSG T
Sbjct: 187 GRGVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLFDGNECVIKEKKSGVT 246

Query: 519 IAIVHMT 539
           +A+V  T
Sbjct: 247 LAMVKKT 253


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +3

Query: 84  GHKEADCWSKQRDEKQIQANFTENSEEESRLFMAQSVTHDPVSGVWFLDSGCSNHMSGTK 263
           G  + +CW K+R EKQ  AN+ E  E++ +LFMA +      + +WFLDSGCSNHM+G K
Sbjct: 248 GDAQXECWKKERQEKQ--ANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIK 305

Query: 264 SLFRELDESQKGEVRLGDDKQMKVEGKGTVAIKTIRGDVKLLYDVQFVPNLAYNMLSIGQ 443
           SLF+ELDES K +V+LGDDKQ++VEGKGT A+    G+VKLLY+V F+P+L  N+LS+GQ
Sbjct: 306 SLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQ 365

Query: 444 VMLNGYKVVFDGDACAINDKKSGQTIAIVHM 536
           +M++GY ++FDG  C I DKKS Q I  V M
Sbjct: 366 LMVSGYSILFDGATCVIKDKKSDQIIVBVRM 396