BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050983
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   148   4e-34
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t...   138   5e-31
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   134   6e-30
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]              134   1e-29
gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcrip...   134   1e-29

>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  148 bits (374), Expect = 4e-34
 Identities = 76/147 (51%), Positives = 98/147 (66%), Gaps = 13/147 (8%)
 Frame = +1

Query: 1   YIINRIPSRAVKESTPYESYYHRKPNIEHIRVFGCVAYAKTVGTHLKKLDDRSRKTVHFG 180
           Y+INR+P+RA+K  TPYES+  RKP+I HIRVFGC+AYAK     LKKLDDRS+  VH G
Sbjct: 531 YLINRVPTRALKNQTPYESFKGRKPSIGHIRVFGCLAYAKLDAALLKKLDDRSQTLVHLG 590

Query: 181 SEPGSKAYCLFEPKSRKIIISRDVIFDESSNWNW---DKGPESALKPGMFWVHWQNLVDT 351
            EPGSKAY L+ P +R+I++SRDV FDE + WNW   DKG +   + G F + W + +D 
Sbjct: 591 IEPGSKAYRLYNPSTRRIVVSRDVKFDEKACWNWNETDKGNQE--ESGKFHMTWGSSIDE 648

Query: 352 GDG----------QVADETDQGEEENE 402
           G+G           +A ET+Q EE  E
Sbjct: 649 GNGPFVIGSHQEENIATETEQQEETTE 675


>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1250

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/138 (48%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   YIINRIPSRAVKESTPYESYYHRKPNIEHIRVFGCVAYAKTVGTHLKKLDDRSRKTVHFG 180
           Y+INR+ +R +   TPYE+Y  RKPN+EHIRVFGCV YA+    HLKKLDD SR  VH G
Sbjct: 507 YVINRVATRVLTNQTPYEAYKGRKPNVEHIRVFGCVGYARIESPHLKKLDDISRSLVHLG 566

Query: 181 SEPGSKAYCLFEPKSRKIIISRDVIFDESSNWNW-DKGPESALKPGMFWVHWQNLVDTGD 357
           +EPGSKAYCL +  + KI++SRDV+FDE+ +W W D   ES    G F + ++   + G 
Sbjct: 567 TEPGSKAYCLLDLTTHKIVVSRDVVFDETKSWKWNDLRSESTEDSGNFVLGFEQFGNNGL 626

Query: 358 GQVADETDQGEEENEQGS 411
            +  +E   G E +E+ +
Sbjct: 627 RREREE--HGSETSEKNT 642


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/136 (49%), Positives = 92/136 (67%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1   YIINRIPSRAVKESTPYESYYHRKPNIEHIRVFGCVAYAKTVGTHLKKLDDRSRKTVHFG 180
           Y+INR+ +RA+   TPYE+   +KPN+EH+RVFGCV+YAK    HL+KLD+RSR  V+ G
Sbjct: 587 YLINRVGTRALINQTPYEALKKKKPNVEHLRVFGCVSYAKVEFPHLRKLDERSRILVYLG 646

Query: 181 SEPGSKAYCLFEPKSRKIIISRDVIFDESSNWNWDKGP--ESALKPGMFWVHWQNLVDTG 354
           +E GSKAY L +P +RKII+SRDV+FDE+ +W W      E   +PGMF +         
Sbjct: 647 TETGSKAYTLLDPTTRKIIVSRDVVFDENKSWKWANSELIEIQKEPGMFTLAQTEF--HN 704

Query: 355 DGQVADETDQGEEENE 402
           + +V +ET +  EENE
Sbjct: 705 NEEVENETSEEIEENE 720


>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
          Length = 1188

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/133 (46%), Positives = 89/133 (66%)
 Frame = +1

Query: 1   YIINRIPSRAVKESTPYESYYHRKPNIEHIRVFGCVAYAKTVGTHLKKLDDRSRKTVHFG 180
           Y++NRI +R++K+ TPYE +  R+P +EHIR+FGC+AYAK     L+KLDDRSR  +H G
Sbjct: 576 YLLNRIITRSLKDKTPYECFRDRRPTVEHIRIFGCIAYAKIDKQQLRKLDDRSRILIHLG 635

Query: 181 SEPGSKAYCLFEPKSRKIIISRDVIFDESSNWNWDKGPESALKPGMFWVHWQNLVDTGDG 360
           +EPGSKAY LF+P+++K+++SRDV+FDE   W+W          G F + + N  + G  
Sbjct: 636 TEPGSKAYRLFDPQTQKVVVSRDVVFDEGKGWDWKYSNTGKDGDGSFDITFHNFGNHG-L 694

Query: 361 QVADETDQGEEEN 399
           Q  +E  Q E  N
Sbjct: 695 QDYEEISQSEHAN 707


>gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcriptase proteins [Arabidopsis
           thaliana]
          Length = 833

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/133 (46%), Positives = 89/133 (66%)
 Frame = +1

Query: 1   YIINRIPSRAVKESTPYESYYHRKPNIEHIRVFGCVAYAKTVGTHLKKLDDRSRKTVHFG 180
           Y++NRI +R++K+ TPYE +  R+P +EHIR+FGC+AYAK     L+KLDDRSR  +H G
Sbjct: 194 YLLNRIITRSLKDKTPYECFRDRRPTVEHIRIFGCIAYAKIDKQQLRKLDDRSRILIHLG 253

Query: 181 SEPGSKAYCLFEPKSRKIIISRDVIFDESSNWNWDKGPESALKPGMFWVHWQNLVDTGDG 360
           +EPGSKAY LF+P+++K+++SRDV+FDE   W+W          G F + + N  + G  
Sbjct: 254 TEPGSKAYRLFDPQTQKVVVSRDVVFDEGKGWDWKYSNTGKDGDGSFDITFHNFGNHG-L 312

Query: 361 QVADETDQGEEEN 399
           Q  +E  Q E  N
Sbjct: 313 QDYEEISQSEHAN 325