BLASTX nr result

ID: Atractylodes21_contig00050957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050957
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330489.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002309220.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003550832.1| PREDICTED: uncharacterized protein LOC100794...   101   6e-20
ref|XP_004170003.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    99   3e-19
ref|XP_004150016.1| PREDICTED: zinc finger Ran-binding domain-co...    99   3e-19

>ref|XP_002330489.1| predicted protein [Populus trichocarpa] gi|222872423|gb|EEF09554.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
 Frame = +2

Query: 8   PDEISTHANKTKVLAGDWYCC---CEAHNFANRTECYRCGAHKNYIMMMAFATSSYPYEA 178
           PD  +   N TKVLAGDWYC    C AHN+A+R+ CY CG  K+       A   Y  + 
Sbjct: 36  PDPATYICNATKVLAGDWYCTVINCHAHNYASRSSCYSCGTLKS-----GHAAGGYASDG 90

Query: 179 SILPGGKIGDWMCNR--CSGHNFASKVECYRCKSPRE 283
           S  PG K GDW+CNR  C  HN+AS++ECYRC++PRE
Sbjct: 91  SDPPGWKTGDWICNRSGCGVHNYASRMECYRCRTPRE 127


>ref|XP_002309220.1| predicted protein [Populus trichocarpa] gi|222855196|gb|EEE92743.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
 Frame = +2

Query: 8   PDEISTHANKTKVLAGDWYCC---CEAHNFANRTECYRCGAHKNYIMMMAFATSSYPYEA 178
           PD  +   N TKVLAGDWYC    C+AHN+A+R+ CY CGA ++      + +++Y  + 
Sbjct: 36  PDPATYICNATKVLAGDWYCSAMNCQAHNYASRSSCYNCGALRDDHAAGGYGSNAYGSDG 95

Query: 179 SILPGGKIGDWMCNR--CSGHNFASKVECYRCKSPRE 283
           S  PG K GDW+C R  C  HN+AS++EC++C++PRE
Sbjct: 96  SDPPGWKTGDWICTRLGCGVHNYASRMECFKCRTPRE 132


>ref|XP_003550832.1| PREDICTED: uncharacterized protein LOC100794904 [Glycine max]
          Length = 159

 Score =  101 bits (252), Expect = 6e-20
 Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
 Frame = +2

Query: 32  NKTKVLAGDWYCCCEAHNFANRTECYRCGAHKNYIMMMAFATSSYPYEASILPGGKIGDW 211
           NKT+ LAGDW+C C AHN+A+R+ CYRCGA K+Y     + + ++P      PG K GDW
Sbjct: 43  NKTEALAGDWFCNCGAHNYASRSSCYRCGAIKDYYSSGEYGSDTFP------PGWKNGDW 96

Query: 212 MCNR--CSGHNFASKVECYRCKSPRE 283
           +C R  C  HN+AS+ EC++CK PR+
Sbjct: 97  LCPRIGCGVHNYASRTECFKCKVPRD 122


>ref|XP_004170003.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding
           domain-containing protein 2-like [Cucumis sativus]
          Length = 140

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 13/105 (12%)
 Frame = +2

Query: 8   PDEISTHANKTKVLAGDWYCC---CEAHNFANRTECYRCGAHKN--------YIMMMAFA 154
           PD  +   NKT+ LAGDWYC    C AHN+A+R  C+RCGA K+        Y+M     
Sbjct: 35  PDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM----G 90

Query: 155 TSSYPYEASILPGGKIGDWMCNR--CSGHNFASKVECYRCKSPRE 283
           +  Y  +ASI PG K GDW+C R  C  HN+AS++EC++CK+PR+
Sbjct: 91  SDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD 135


>ref|XP_004150016.1| PREDICTED: zinc finger Ran-binding domain-containing protein 2-like
           [Cucumis sativus]
          Length = 140

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 13/105 (12%)
 Frame = +2

Query: 8   PDEISTHANKTKVLAGDWYCC---CEAHNFANRTECYRCGAHKN--------YIMMMAFA 154
           PD  +   NKT+ LAGDWYC    C AHN+A+R  C+RCGA K+        Y+M     
Sbjct: 35  PDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM----G 90

Query: 155 TSSYPYEASILPGGKIGDWMCNR--CSGHNFASKVECYRCKSPRE 283
           +  Y  +ASI PG K GDW+C R  C  HN+AS++EC++CK+PR+
Sbjct: 91  SDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD 135


Top