BLASTX nr result

ID: Atractylodes21_contig00050926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050926
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]    59   8e-07
ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
          Length = 330

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
 Frame = +2

Query: 335 MSLHTLNYSSHLLGKLSKQRILHKTRMDPVLVVTPGR------RKDNKPDSTKSFGLNSA 496
           MS H+L Y SH++G + K  IL +T  +P+L V P           N P+S  S G ++A
Sbjct: 3   MSFHSLKYPSHMMGNVHKHXILXRTMKNPILAVPPSSTLLQTDESGNLPESKNSSGSDAA 62

Query: 497 SVSSRNPIKGSLLCQTNAVGIIGGVSAD 580
           S +S +      + Q   VGIIGGVS D
Sbjct: 63  STNSDS--ASLFINQATTVGIIGGVSVD 88


>ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|222840690|gb|EEE78237.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/88 (40%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = +2

Query: 335 MSLHTLNYSSHLLGKLSKQRILHKTRMDPVLVVTPGR------RKDNKPDSTKSFGLNSA 496
           M  HTL +  HLLG ++  R LHK+R+ PVL + P             PDS K  GL   
Sbjct: 8   MPFHTL-HPCHLLGHVNTHRALHKSRLQPVLAIPPSSILLHTDESGKFPDSKKGSGLRGR 66

Query: 497 SVSSRNPIKGSLLCQTNAVGIIGGVSAD 580
             S       SLL Q N VGIIGG+S +
Sbjct: 67  DSSD------SLLSQANTVGIIGGISVN 88


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