BLASTX nr result

ID: Atractylodes21_contig00050894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050894
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529293.1| ring finger protein, putative [Ricinus commu...    86   4e-15
ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...    84   2e-14
ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like...    83   3e-14
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...    81   8e-14
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]    81   8e-14

>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
           gi|223531217|gb|EEF33062.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 48/93 (51%), Positives = 63/93 (67%)
 Frame = +1

Query: 22  LANPISQNSNLIHSPMDHQQNSASGFPILAIAALCIVATAFLLVSYYFFVTRGCFNWQQV 201
           + NP S NS   ++P  H  +S + FPI+AIA + I+ATAFLLVSYY FV + C NW ++
Sbjct: 16  ITNPSSANS-FFNNP--HSHSSDTSFPIIAIAIIGILATAFLLVSYYIFVIKCCLNWHRI 72

Query: 202 NPLRRFSMSRERSSPDPLSSAYSTPPWQARGLD 300
           + LRRFS+SR R+  DPL   YS P  + RGLD
Sbjct: 73  DILRRFSLSRNRNQEDPL-MGYS-PAMENRGLD 103


>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/91 (49%), Positives = 58/91 (63%)
 Frame = +1

Query: 28  NPISQNSNLIHSPMDHQQNSASGFPILAIAALCIVATAFLLVSYYFFVTRGCFNWQQVNP 207
           +PI+   + I  P  HQ +S++ FPI+AIA + I+ATAFLLVSYY FV + C NW +++ 
Sbjct: 23  SPITSPGSSIFHP--HQHSSSTSFPIIAIAIIGIMATAFLLVSYYIFVIKCCLNWHRIDV 80

Query: 208 LRRFSMSRERSSPDPLSSAYSTPPWQARGLD 300
           LRRFS SR R  P P  S    P    RGLD
Sbjct: 81  LRRFSPSRRREDPPPTYS----PGTDTRGLD 107


>ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 367

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/91 (49%), Positives = 57/91 (62%)
 Frame = +1

Query: 28  NPISQNSNLIHSPMDHQQNSASGFPILAIAALCIVATAFLLVSYYFFVTRGCFNWQQVNP 207
           +PI+   + I  P  HQ  S++ FPI+AIA + I+ATAFLLVSYY FV + C NW +++ 
Sbjct: 23  SPITSPGSSIFHP--HQHASSTSFPIIAIAIIGIMATAFLLVSYYIFVIKCCLNWHRIDV 80

Query: 208 LRRFSMSRERSSPDPLSSAYSTPPWQARGLD 300
           LRRFS SR R  P P  S    P    RGLD
Sbjct: 81  LRRFSPSRRREDPPPTYS----PATDTRGLD 107


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = +1

Query: 37  SQNSNLIHSPMDHQQNSASGFPILAIAALCIVATAFLLVSYYFFVTRGCFNWQQVNPLRR 216
           SQ S+++ SP     +S + FPI+AIA + I+ATAFLLVSYY FV + C NW +++ LRR
Sbjct: 28  SQASSVLPSP---SHSSDTSFPIIAIAVIGILATAFLLVSYYIFVIKCCLNWHRIDLLRR 84

Query: 217 FSMSRERSSPDPLSSAYSTPPWQARGLD 300
           FS SR R   DPL   YS P  ++RGLD
Sbjct: 85  FSFSRSRHPEDPL-MVYS-PAIESRGLD 110


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = +1

Query: 37  SQNSNLIHSPMDHQQNSASGFPILAIAALCIVATAFLLVSYYFFVTRGCFNWQQVNPLRR 216
           SQ S+++ SP     +S + FPI+AIA + I+ATAFLLVSYY FV + C NW +++ LRR
Sbjct: 88  SQASSVLPSP---SHSSDTSFPIIAIAVIGILATAFLLVSYYIFVIKCCLNWHRIDLLRR 144

Query: 217 FSMSRERSSPDPLSSAYSTPPWQARGLD 300
           FS SR R   DPL   YS P  ++RGLD
Sbjct: 145 FSFSRSRHREDPL-MVYS-PAIESRGLD 170


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