BLASTX nr result

ID: Atractylodes21_contig00050814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050814
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31490.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_002274802.1| PREDICTED: general transcription factor IIF ...   147   7e-34
ref|XP_002534300.1| Transcription initiation factor IIF subunit ...   147   1e-33
ref|XP_002315290.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_003524637.1| PREDICTED: general transcription factor IIF ...   135   4e-30

>emb|CBI31490.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/85 (82%), Positives = 74/85 (87%)
 Frame = -3

Query: 476 KKAPVKGSDTKRTSRDCGEMECIMFKLFERQSNWTLKQLISETDQPEQFLKDLLKDLCIY 297
           KK P KGSD KRT RD GEME I+FKLFERQ NWTL+QLI ETDQPEQFLKDLLKDLC+Y
Sbjct: 215 KKMPTKGSDMKRTRRDRGEMEEILFKLFERQPNWTLRQLIQETDQPEQFLKDLLKDLCVY 274

Query: 296 NNKGSNQGTYELKPEYKRSTEEQEP 222
           NNKG+NQGTYELKPEYKRS EE  P
Sbjct: 275 NNKGTNQGTYELKPEYKRSGEESTP 299


>ref|XP_002274802.1| PREDICTED: general transcription factor IIF subunit 2 [Vitis
           vinifera]
          Length = 257

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/85 (82%), Positives = 74/85 (87%)
 Frame = -3

Query: 476 KKAPVKGSDTKRTSRDCGEMECIMFKLFERQSNWTLKQLISETDQPEQFLKDLLKDLCIY 297
           KK P KGSD KRT RD GEME I+FKLFERQ NWTL+QLI ETDQPEQFLKDLLKDLC+Y
Sbjct: 172 KKMPTKGSDMKRTRRDRGEMEEILFKLFERQPNWTLRQLIQETDQPEQFLKDLLKDLCVY 231

Query: 296 NNKGSNQGTYELKPEYKRSTEEQEP 222
           NNKG+NQGTYELKPEYKRS EE  P
Sbjct: 232 NNKGTNQGTYELKPEYKRSGEESTP 256


>ref|XP_002534300.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
           communis] gi|223525544|gb|EEF28082.1| Transcription
           initiation factor IIF subunit beta, putative [Ricinus
           communis]
          Length = 278

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/86 (77%), Positives = 75/86 (87%)
 Frame = -3

Query: 476 KKAPVKGSDTKRTSRDCGEMECIMFKLFERQSNWTLKQLISETDQPEQFLKDLLKDLCIY 297
           KK P K +D KRT RD GEME IMFKLFERQ NWTL+QLI ETDQPEQFLKD+LK+LC+Y
Sbjct: 193 KKPPAKATDVKRTRRDRGEMEAIMFKLFERQPNWTLRQLIQETDQPEQFLKDILKELCVY 252

Query: 296 NNKGSNQGTYELKPEYKRSTEEQEPA 219
           NNKG+NQG+YELKPEYKRSTEE  P+
Sbjct: 253 NNKGTNQGSYELKPEYKRSTEESSPS 278


>ref|XP_002315290.1| predicted protein [Populus trichocarpa] gi|222864330|gb|EEF01461.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/88 (76%), Positives = 76/88 (86%)
 Frame = -3

Query: 476 KKAPVKGSDTKRTSRDCGEMECIMFKLFERQSNWTLKQLISETDQPEQFLKDLLKDLCIY 297
           KK P+K SD KRT RD  EME IMFKLFE+Q NWTLKQL+ ETDQPEQF+KD+LKDLC+Y
Sbjct: 181 KKLPIKASDMKRTRRDRREMEGIMFKLFEKQPNWTLKQLVQETDQPEQFVKDMLKDLCVY 240

Query: 296 NNKGSNQGTYELKPEYKRSTEEQEPAPK 213
           NNKGSNQG+YELKPEYK+S E  EPAP+
Sbjct: 241 NNKGSNQGSYELKPEYKKSNE--EPAPE 266


>ref|XP_003524637.1| PREDICTED: general transcription factor IIF subunit 2-like [Glycine
           max]
          Length = 252

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/79 (77%), Positives = 71/79 (89%)
 Frame = -3

Query: 476 KKAPVKGSDTKRTSRDCGEMECIMFKLFERQSNWTLKQLISETDQPEQFLKDLLKDLCIY 297
           KK+P K +DTKRT RD GEME I+FKLFERQ NW+L+ LI ETDQPEQFLKD+LKDLC+Y
Sbjct: 172 KKSPAKATDTKRTRRDRGEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDILKDLCVY 231

Query: 296 NNKGSNQGTYELKPEYKRS 240
           NNKG+NQGTYELKPEY++S
Sbjct: 232 NNKGTNQGTYELKPEYRKS 250


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