BLASTX nr result
ID: Atractylodes21_contig00050772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00050772
(593 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 189 1e-58
ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|2... 176 5e-51
emb|CBI29825.3| unnamed protein product [Vitis vinifera] 160 7e-50
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 192 4e-47
ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containi... 160 5e-44
>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
[Vitis vinifera]
Length = 798
Score = 189 bits (480), Expect(2) = 1e-58
Identities = 90/165 (54%), Positives = 119/165 (72%), Gaps = 5/165 (3%)
Frame = +2
Query: 2 CKAGILDGAFKLF-----KGISPGSVTYGTLIHGLQSVVREDDAFMLFEEMVINGCKPTP 166
CKA ++GAFKLF KG SP SVTYGTLI G V RE+DAF + ++MV NGC P+
Sbjct: 540 CKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSS 599
Query: 167 AVYKTLMKWSCRRKKTFVAFDLWLRYLRSLPKRDEKAIKLVEEHLQNGEVERPVRLLLDM 346
AVYK LM WSCR+ K VAF LWL+YLRSLP ++++ +KL EEH + GE+E+ VR LL+M
Sbjct: 600 AVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEM 659
Query: 347 DIKLRDLDSAPYTIWLIGFCQGHKTTEALTLLAILQEYNINLTPP 481
+ KL + + APYTIWLIG CQ ++ EAL + +L+E +++ PP
Sbjct: 660 NFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPP 704
Score = 63.2 bits (152), Expect(2) = 1e-58
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +3
Query: 474 HPPCCVMLISSLCREGKLNLAVEVFLYALQKGFILKPRIC 593
+PP CVMLI+ LC++G L +AV++FLY L+KGF+L PRIC
Sbjct: 702 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC 741
>ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|222854000|gb|EEE91547.1|
predicted protein [Populus trichocarpa]
Length = 789
Score = 176 bits (447), Expect(2) = 5e-51
Identities = 84/165 (50%), Positives = 114/165 (69%), Gaps = 5/165 (3%)
Frame = +2
Query: 2 CKAGILDGAFKLF-----KGISPGSVTYGTLIHGLQSVVREDDAFMLFEEMVINGCKPTP 166
CK G +GA+KLF KG+SP +VTYGTLI+GL RE+DA+ +F++M NGC P
Sbjct: 535 CKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDA 594
Query: 167 AVYKTLMKWSCRRKKTFVAFDLWLRYLRSLPKRDEKAIKLVEEHLQNGEVERPVRLLLDM 346
AVY+T+M W CRR + AF LWL+YLR++ ++++AIK +E + + EVE+ VR LL+M
Sbjct: 595 AVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEM 654
Query: 347 DIKLRDLDSAPYTIWLIGFCQGHKTTEALTLLAILQEYNINLTPP 481
D KL D D PY IWLIG CQ + EAL + IL+EY + +TPP
Sbjct: 655 DFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPP 699
Score = 50.4 bits (119), Expect(2) = 5e-51
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +3
Query: 477 PPCCVMLISSLCREGKLNLAVEVFLYALQKGFILKPRI 590
PPCCV LI L +EG L+ A++VFLY ++KG++L+ R+
Sbjct: 698 PPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRV 735
>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 160 bits (404), Expect(2) = 7e-50
Identities = 79/172 (45%), Positives = 110/172 (63%), Gaps = 12/172 (6%)
Frame = +2
Query: 2 CKAGILDGAF------------KLFKGISPGSVTYGTLIHGLQSVVREDDAFMLFEEMVI 145
CKAG L+ A LF +S G+ +G V RE+DAF + ++MV
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVK 516
Query: 146 NGCKPTPAVYKTLMKWSCRRKKTFVAFDLWLRYLRSLPKRDEKAIKLVEEHLQNGEVERP 325
NGC P+ AVYK LM WSCR+ K VAF LWL+YLRSLP ++++ +KL EEH + GE+E+
Sbjct: 517 NGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKA 576
Query: 326 VRLLLDMDIKLRDLDSAPYTIWLIGFCQGHKTTEALTLLAILQEYNINLTPP 481
VR LL+M+ KL + + APYTIWLIG CQ ++ EAL + +L+E +++ PP
Sbjct: 577 VRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPP 628
Score = 63.2 bits (152), Expect(2) = 7e-50
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +3
Query: 474 HPPCCVMLISSLCREGKLNLAVEVFLYALQKGFILKPRIC 593
+PP CVMLI+ LC++G L +AV++FLY L+KGF+L PRIC
Sbjct: 626 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC 665
>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 804
Score = 192 bits (488), Expect = 4e-47
Identities = 93/165 (56%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Frame = +2
Query: 2 CKAGILDGAFKLFK-----GISPGSVTYGTLIHGLQSVVREDDAFMLFEEMVINGCKPTP 166
CKAG ++GAFKLFK G+SP SVTYGTLI+GL S RE+DAF + ++++ NGC P
Sbjct: 535 CKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPIT 594
Query: 167 AVYKTLMKWSCRRKKTFVAFDLWLRYLRSLPKRDEKAIKLVEEHLQNGEVERPVRLLLDM 346
VYK+ M WSCRR K +AF LWL+YLRS+P RD + +K VEE+ + GEVE VR LL+M
Sbjct: 595 EVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEM 654
Query: 347 DIKLRDLDSAPYTIWLIGFCQGHKTTEALTLLAILQEYNINLTPP 481
D KL D APYTIWLIG CQ + EAL + L+E+N+ +TPP
Sbjct: 655 DFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPP 699
>ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Glycine max]
Length = 555
Score = 160 bits (406), Expect(2) = 5e-44
Identities = 80/164 (48%), Positives = 109/164 (66%), Gaps = 5/164 (3%)
Frame = +2
Query: 2 CKAGILDGAFKLFK-----GISPGSVTYGTLIHGLQSVVREDDAFMLFEEMVINGCKPTP 166
CKA ++GA KLFK G+SP VTYGTLI GL V RE+DAF + + M+ +GC+P+
Sbjct: 317 CKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKHGCEPSF 376
Query: 167 AVYKTLMKWSCRRKKTFVAFDLWLRYLRSLPKRDEKAIKLVEEHLQNGEVERPVRLLLDM 346
VY+ LM W CR+K+ AF L+L YL++L R++ +I +EE GEVE+ R LL++
Sbjct: 377 EVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGREDNSINALEECFVRGEVEQAFRGLLEL 436
Query: 347 DIKLRDLDSAPYTIWLIGFCQGHKTTEALTLLAILQEYNINLTP 478
D + RD APYTI LIGFCQ K EAL + +L ++NIN+ P
Sbjct: 437 DFRFRDFALAPYTILLIGFCQAEKVNEALLIFTVLDKFNININP 480
Score = 42.7 bits (99), Expect(2) = 5e-44
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 474 HPPCCVMLISSLCREGKLNLAVEVFLYALQKGFILKPRIC 593
+P CV LI L G+L+ AV +F+Y L KGF LK +C
Sbjct: 479 NPASCVYLIRGLSENGRLDDAVNIFVYTLDKGFKLKSSVC 518