BLASTX nr result

ID: Atractylodes21_contig00050674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050674
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi...   260   1e-67
emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]   259   2e-67
ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2...   252   2e-65
ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containi...   228   6e-58
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat...   226   1e-57

>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
           gi|297738773|emb|CBI28018.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score =  260 bits (664), Expect = 1e-67
 Identities = 117/180 (65%), Positives = 155/180 (86%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F  +  + ++SWNSMI+GYAQNGKDLEAL LYEEM ++N+KPD+ITFVGVLSAC+H GL
Sbjct: 379 VFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGL 438

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSMPYKPNGLIWSTLL 361
            ERG+ YF+S+++ +G+ PT DHY+CMINLLGR+G+ +KAV++IKSM ++PN LIWSTLL
Sbjct: 439 VERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLL 498

Query: 362 SVCKLNGNIEHGEMAAKHLFEVEPSNAEPYITLSNLYAVNGRWKDMAAMRSLMNNKKVKK 541
           SVC++N ++ +GEMAA+HLFE++P NA PYI LSN+YA  GRWKD+AA+RSLM N K+KK
Sbjct: 499 SVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKK 558



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F+ +  K +VSWNSMI GY QNG+     +L+ EM++  + PD +T   +LSA    G 
Sbjct: 212 LFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGY 271

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSM---PYKPNGLIWS 352
            +   + F  + E+  +  T+    C      ++G  E A+ + + M     +P+    S
Sbjct: 272 IDEACKTFREIKEKDKVCWTTMMVGC-----AQNGKEEDALLLFREMLLENVRPDNFTIS 326

Query: 353 TLLSVCKLNGNIEHGE 400
           +++S C    ++  G+
Sbjct: 327 SVVSSCARLASLCQGQ 342


>emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]
          Length = 420

 Score =  259 bits (662), Expect = 2e-67
 Identities = 117/180 (65%), Positives = 154/180 (85%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F  +  + ++SWNSMI+GYAQNGKDLEAL LYEEM ++N+KPD+ITFVGVLSAC+H GL
Sbjct: 67  VFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGL 126

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSMPYKPNGLIWSTLL 361
            ERG+ YF+S+++ +G  PT DHY+CMINLLGR+G+ +KAV++IKSM ++PN LIWSTLL
Sbjct: 127 VERGQGYFYSISKIHGXNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLL 186

Query: 362 SVCKLNGNIEHGEMAAKHLFEVEPSNAEPYITLSNLYAVNGRWKDMAAMRSLMNNKKVKK 541
           SVC++N ++ +GEMAA+HLFE++P NA PYI LSN+YA  GRWKD+AA+RSLM N K+KK
Sbjct: 187 SVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKK 246


>ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1|
           predicted protein [Populus trichocarpa]
          Length = 695

 Score =  252 bits (644), Expect = 2e-65
 Identities = 115/180 (63%), Positives = 147/180 (81%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           IF+T+  + +VSWNSMI GYA NG+DLEAL LYE M  +N+KPDS+TFVGVLSAC+H GL
Sbjct: 379 IFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGL 438

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSMPYKPNGLIWSTLL 361
            E G++YF SM++Q+G+ PT DHYACM+NL GRSGH +KAV++I SM  +PN LIW+T+L
Sbjct: 439 VEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVL 498

Query: 362 SVCKLNGNIEHGEMAAKHLFEVEPSNAEPYITLSNLYAVNGRWKDMAAMRSLMNNKKVKK 541
           SVC + G+I+HGEMAA+ L E+ P NA PYI LSN+YA  GRWKD+A++RSLM +K VKK
Sbjct: 499 SVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKK 558



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F+ +  + +V+WN MI GY +N +  + ++L+ EM+  N+KPD +T   VL A I  G 
Sbjct: 212 LFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGY 271

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSM---PYKPNGLIWS 352
            +   + F  + E+  +      +  MI    ++G  E A+ +   M     +P+G   S
Sbjct: 272 IDEARKVFGEIREKDEVC-----WTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTIS 326

Query: 353 TLLSVCKLNGNIEHGEM 403
           +++S C    ++ HG++
Sbjct: 327 SVVSSCAKLASLYHGQV 343


>ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  228 bits (580), Expect = 6e-58
 Identities = 108/180 (60%), Positives = 142/180 (78%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           IF T+  + +++WN+MI+GYAQNG+ LEAL LYE M+ +N KPD+ITFVGVLSACI+  +
Sbjct: 379 IFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADM 438

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSMPYKPNGLIWSTLL 361
            + G++YF S++E +GI PT DHYACMI LLGRSG  +KAV++I+ MP++PN  IWSTLL
Sbjct: 439 VKEGQKYFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLL 497

Query: 362 SVCKLNGNIEHGEMAAKHLFEVEPSNAEPYITLSNLYAVNGRWKDMAAMRSLMNNKKVKK 541
           SVC   G++++ E+AA HLFE++P NA PYI LSNLYA  GRWKD+A +RSLM  K  KK
Sbjct: 498 SVC-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKK 556



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/129 (28%), Positives = 66/129 (51%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F  +  K  + W +MI+GYAQNG++ +A  L+ +M   N+KPDS T   ++S+C     
Sbjct: 278 LFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLAS 337

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSMPYKPNGLIWSTLL 361
              G Q  H      GI  +    + ++++  + G T  A  I ++MP + N + W+ ++
Sbjct: 338 LYHG-QVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR-NVITWNAMI 395

Query: 362 SVCKLNGNI 388
                NG +
Sbjct: 396 LGYAQNGQV 404



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F+ +  K +VSWN MI GY + G   E + L+ EM+   +KPD +T   VL+A    G 
Sbjct: 212 LFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGR 271

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSM---PYKPNGLIWS 352
            +     F  + ++  I  T+     MI    ++G  E A  +   M     KP+    S
Sbjct: 272 VDDARNLFIKLPKKDEICWTT-----MIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTIS 326

Query: 353 TLLSVCKLNGNIEHGEM 403
           +++S C    ++ HG++
Sbjct: 327 SMVSSCAKLASLYHGQV 343


>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  226 bits (577), Expect = 1e-57
 Identities = 101/180 (56%), Positives = 141/180 (78%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +FN +  + +VSWN+MI+G AQNG D +ALEL+E M     KPD++TF+G+LSAC+H   
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSMPYKPNGLIWSTLL 361
            E+G++YF S+T Q+G+ PT DHYACM+NLLGR+G  E+AV +IK+M + P+ LIWSTLL
Sbjct: 439 IEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498

Query: 362 SVCKLNGNIEHGEMAAKHLFEVEPSNAEPYITLSNLYAVNGRWKDMAAMRSLMNNKKVKK 541
           S+C   G+I + E+AA+HLFE++P+ A PYI LSN+YA  GRWKD+A++R+LM +K VKK
Sbjct: 499 SICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKK 558



 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 42/141 (29%), Positives = 73/141 (51%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F+    K IV W +M++GYA+NG++ +AL L+ EM  ++I+PDS T   V+S+C     
Sbjct: 278 VFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLAS 337

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSMPYKPNGLIWSTLL 361
              G Q  H  +   G+       + +I++  + G  + A  +   MP + N + W+ ++
Sbjct: 338 LHHG-QAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMI 395

Query: 362 SVCKLNGNIEHGEMAAKHLFE 424
             C  NG+    +  A  LFE
Sbjct: 396 VGCAQNGH----DKDALELFE 412



 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
 Frame = +2

Query: 2   IFNTIHAKTIVSWNSMIIGYAQNGKDLEALELYEEMRNDNIKPDSITFVGVLSACIHEGL 181
           +F+ +  K +VSWN MI GYA+NG+  + + L  +MR     PD +T   +++A    G 
Sbjct: 212 LFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGR 271

Query: 182 TERGEQYFHSMTEQYGIIPTSDHYACMINLLGRSGHTEKAVEIIKSM---PYKPNGLIWS 352
            +   + F    E+  +      +  M+    ++G  E A+ +   M     +P+    S
Sbjct: 272 VDEARRVFSEFKEKDIVC-----WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLS 326

Query: 353 TLLSVCKLNGNIEHGE-MAAKHLFEVEPSNAEPYITLSNLYAVNGRWKDMAAMRSLMNNK 529
           +++S C    ++ HG+ +  K +     +N      L ++Y+  G   D  ++ +LM  +
Sbjct: 327 SVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR 386

Query: 530 KV 535
            V
Sbjct: 387 NV 388


Top