BLASTX nr result

ID: Atractylodes21_contig00050668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050668
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   142   2e-32
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          105   4e-21
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   104   9e-21
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   101   6e-20
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   100   1e-19

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/109 (64%), Positives = 87/109 (79%)
 Frame = -1

Query: 329 IKDDDIAW*IDSGATNHVCKDRRWFQEL*TC*RGSVLCMGNESSAPIIGKGSVMLEFTSG 150
           ++DD++AW IDSGAT HVCKDR WF+       GSVL MGNES+API+G+G V+LEF+SG
Sbjct: 260 VQDDEVAWWIDSGATIHVCKDRGWFKTYEPVQDGSVLYMGNESTAPILGRGKVVLEFSSG 319

Query: 149 KQIVLNNVLFVHNI*KNLVSGSILNKLGYKQVFESDKYILSHNGSFVGF 3
           K + LN+V+ V  I KNLVSGS+LNK G+KQV+ESDKY+LS  G FVGF
Sbjct: 320 KTLDLNDVIHVPGIRKNLVSGSVLNKCGFKQVYESDKYVLSKCGVFVGF 368


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/101 (52%), Positives = 68/101 (67%)
 Frame = -1

Query: 308 W*IDSGATNHVCKDRRWFQEL*TC*RGSVLCMGNESSAPIIGKGSVMLEFTSGKQIVLNN 129
           W ID+GAT HVC D+  F           L MGN +++ I G+G V L+ TSGK++ LNN
Sbjct: 325 WWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNN 384

Query: 128 VLFVHNI*KNLVSGSILNKLGYKQVFESDKYILSHNGSFVG 6
           VL+V  I KNLVSGS+LNK G++ VFESD  +LS NG +VG
Sbjct: 385 VLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVG 425


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/101 (49%), Positives = 71/101 (70%)
 Frame = -1

Query: 308 W*IDSGATNHVCKDRRWFQEL*TC*RGSVLCMGNESSAPIIGKGSVMLEFTSGKQIVLNN 129
           W ID+GAT HVC D++ F        G  + MGN +++ I G+G V+L+ TSGK++ L N
Sbjct: 336 WWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTN 395

Query: 128 VLFVHNI*KNLVSGSILNKLGYKQVFESDKYILSHNGSFVG 6
           VL+V  I KNLVSGS+LN  G++ VFES+K++LS +G +VG
Sbjct: 396 VLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVG 436


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/101 (48%), Positives = 70/101 (69%)
 Frame = -1

Query: 308 W*IDSGATNHVCKDRRWFQEL*TC*RGSVLCMGNESSAPIIGKGSVMLEFTSGKQIVLNN 129
           W ID+GAT HVC D++ F        G  + MGN +++ I G+G V+L+ TSGK++ L N
Sbjct: 336 WWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTN 395

Query: 128 VLFVHNI*KNLVSGSILNKLGYKQVFESDKYILSHNGSFVG 6
           VL+V  I KNLVSGS+LN  G++ VF+S+K +LS +G +VG
Sbjct: 396 VLYVPEIRKNLVSGSLLNNHGFRLVFDSNKVVLSKSGMYVG 436


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/101 (48%), Positives = 69/101 (68%)
 Frame = -1

Query: 308 W*IDSGATNHVCKDRRWFQEL*TC*RGSVLCMGNESSAPIIGKGSVMLEFTSGKQIVLNN 129
           W ID+GAT HVC D++ F        G  + MGN +++ I G+G V+L+ TSGK++ L N
Sbjct: 336 WWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTN 395

Query: 128 VLFVHNI*KNLVSGSILNKLGYKQVFESDKYILSHNGSFVG 6
           VL+V  I KNLV GS+LN  G++ VFES+K +LS +G +VG
Sbjct: 396 VLYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVG 436


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