BLASTX nr result

ID: Atractylodes21_contig00050666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050666
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...    95   5e-18
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    82   4e-14
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]    79   5e-13
gb|ABD78322.1| polyprotein [Primula vulgaris]                          76   3e-12
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]    72   4e-11

>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/70 (62%), Positives = 55/70 (78%)
 Frame = +2

Query: 2   KSLKHLLEQRITTIDQQNWIAKLMGYQFSICYKPGNENRAADALSRVLEGSELCTLMSYP 181
           KSL+ LL+Q+ITT+DQQNW AKL GYQF I YKPG EN+ ADALSRV +  EL +L+ YP
Sbjct: 231 KSLRQLLQQQITTMDQQNWAAKLFGYQFDILYKPGLENKGADALSRVHDSPELHSLVHYP 290

Query: 182 QWSEGASLLD 211
           +W EG  +L+
Sbjct: 291 EWLEGKEVLE 300


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 38/64 (59%), Positives = 46/64 (71%)
 Frame = +2

Query: 2   KSLKHLLEQRITTIDQQNWIAKLMGYQFSICYKPGNENRAADALSRVLEGSELCTLMSYP 181
           KSLK LL+QR+ T +QQNW AKL+GY F I YKPG  N+ ADALSRV E  ELC  ++  
Sbjct: 746 KSLKQLLQQRVVTAEQQNWAAKLLGYDFEIIYKPGKLNKGADALSRVREDGELCQGITSV 805

Query: 182 QWSE 193
           QW +
Sbjct: 806 QWKD 809


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
 Frame = +2

Query: 2    KSLKHLLEQRITTIDQQNWIAKLMGYQFSICYKPGNENRAADALSRVLEGSELCTLM--S 175
            +SLK+LLEQRITT +QQ W+AKL+GY + I YKPG EN AADALSRV+    L  L    
Sbjct: 912  RSLKYLLEQRITTPEQQEWVAKLLGYDYEITYKPGRENSAADALSRVVSSPSLNALFVPQ 971

Query: 176  YPQWSE 193
             P W E
Sbjct: 972  APLWDE 977


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/73 (49%), Positives = 51/73 (69%)
 Frame = +2

Query: 2    KSLKHLLEQRITTIDQQNWIAKLMGYQFSICYKPGNENRAADALSRVLEGSELCTLMSYP 181
            +SLK+LLEQ+I+T  QQ W++KL+GY F I YK G  N+AADALSRV EG  +  ++S P
Sbjct: 852  QSLKYLLEQKISTPSQQKWLSKLLGYNFKIYYKQGALNKAADALSRVNEGQLMSVVVSTP 911

Query: 182  QWSEGASLLDGFD 220
             W     ++D ++
Sbjct: 912  IWEIKKEIMDCYE 924


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/47 (65%), Positives = 39/47 (82%)
 Frame = +2

Query: 2   KSLKHLLEQRITTIDQQNWIAKLMGYQFSICYKPGNENRAADALSRV 142
           +SLK+LLEQR+ T++QQ W+AKL+GY + I YKPG EN A DALSRV
Sbjct: 85  RSLKYLLEQRVVTLEQQKWVAKLLGYDYEILYKPGRENSAVDALSRV 131


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