BLASTX nr result

ID: Atractylodes21_contig00050614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050614
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521372.1| conserved hypothetical protein [Ricinus comm...    82   1e-13
ref|XP_002317116.1| predicted protein [Populus trichocarpa] gi|2...    74   5e-11
ref|XP_002875363.1| hypothetical protein ARALYDRAFT_904940 [Arab...    72   1e-10
ref|XP_002317095.1| predicted protein [Populus trichocarpa] gi|2...    60   6e-07
ref|NP_175421.2| F-box protein [Arabidopsis thaliana] gi|7517743...    60   7e-07

>ref|XP_002521372.1| conserved hypothetical protein [Ricinus communis]
           gi|223539450|gb|EEF41040.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 69/272 (25%), Positives = 136/272 (50%), Gaps = 12/272 (4%)
 Frame = -2

Query: 780 YYVCDPVTRQWVTLPRGRGKSPNRYPFFFGEGFVSKVNEDNMVTSYAVVRVELL---DSP 610
           +Y+C+P T+QW++LP  +    + +     E F S+  + +  T  A  R  ++   +  
Sbjct: 116 FYICNPFTKQWISLPLLKNCKGDDHFGLICEPFYSRSAKQSEYTINAEYRYRVVCFTEIE 175

Query: 609 SNYLKLETFLSETAKWVGYMLPSPKPIRLLKRGAGPIHFNGVLHWFVYDHGMVAFDPYKD 430
              + + T++SE   W  ++L         +  +  +  NG LHWF     +VA+DP+ D
Sbjct: 176 KGNVIVRTYVSEICAWKAFLLYGGD----YQFCSNVVAHNGKLHWF-NGLNVVAYDPFND 230

Query: 429 PKCCWI--IQLQDNRDVESEY---MHEGVYRLCDECQGTLRYFEVAPEGSKLYCFSMWIM 265
            K C+I   ++Q N ++ + Y   + +GV ++      T+ YF    +G  +   S+W +
Sbjct: 231 EKICYINGSEIQPNVEMLNSYYLGVSQGVLKM-THLVSTI-YFN--GDGDDIENLSIWEL 286

Query: 264 KDYDKGEWCCEFKVTRSDLNSSDPELSSWLLEATFLPLSFHPLNLNTVYLRCIELGCIVS 85
           KDY+ G W  E ++   +  S+     + + +   + L+F+P + +TVYL+  +   ++ 
Sbjct: 287 KDYETGHWNLEHRIYSFNAKSNGFRDGTGICDP--VTLAFNPTDKDTVYLKFGQE--VML 342

Query: 84  YDIQNRRLDIA---CKPIGIFE-DLSWRVVIP 1
            D+Q  +L +A    K IG F+ D ++ V++P
Sbjct: 343 CDLQGEKLQLAGEIPKGIGCFDGDKAFPVMLP 374


>ref|XP_002317116.1| predicted protein [Populus trichocarpa] gi|222860181|gb|EEE97728.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 75/272 (27%), Positives = 116/272 (42%), Gaps = 21/272 (7%)
 Frame = -2

Query: 786 LIYYVCDPVTRQWVTLPRGRGKSPNRY-------PFFF----GEGFVSKVNEDNMVTSYA 640
           L YY+C+P T QW+ LP       N Y       P++F    GE F++        + Y 
Sbjct: 166 LQYYICNPFTMQWIALPLLEADYMNDYKVGFVCEPYYFEDSQGESFIN--------SKYR 217

Query: 639 VVRVELLDSPSNYLKLETFLSETAKWVGYMLPSPKPIRLLKRGAGPIHFNGVLHWFVYDH 460
              V      S  + ++T+ SET KW   +L   +   +       +  NG L W   +H
Sbjct: 218 FRVVHFTRVESTQIVMKTYCSETKKWYRSVLEGSEFWWI----TDVVAHNGKLVWCNREH 273

Query: 459 GMVAFDPYKDPKCCWIIQLQDNRDVESEYMHEGVYRLCDEC----QGTLRYFEVAPEGSK 292
            + A+DP+ +P+            +   YM   +     +C    QG L   E+   G  
Sbjct: 274 -IFAYDPF-NPELF--------TSINCSYMQTRLLPAMGKCFGVRQGFLCLMELVGVGID 323

Query: 291 LYCFSMWIMKDYDKGEWCCEFKVTRSDLNSSDPELSSWLLEAT------FLPLSFHPLNL 130
              F +W +KDY+ GEW  E  V+   LN+  PE SS + E          PL FHP + 
Sbjct: 324 -RTFHIWKLKDYNNGEWSLEDHVS---LNAMIPE-SSLVQEIVDGSENKLKPLGFHPSDG 378

Query: 129 NTVYLRCIELGCIVSYDIQNRRLDIACKPIGI 34
           N VYL       ++S++ + + L +A K  G+
Sbjct: 379 NIVYLHFQTY--VISFNTRTKELKMAGKIPGV 408


>ref|XP_002875363.1| hypothetical protein ARALYDRAFT_904940 [Arabidopsis lyrata subsp.
           lyrata] gi|297321201|gb|EFH51622.1| hypothetical protein
           ARALYDRAFT_904940 [Arabidopsis lyrata subsp. lyrata]
          Length = 435

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 21/265 (7%)
 Frame = -2

Query: 798 LLRPLIYYVCDPVTRQWVTLPRGRGKSPNRYPFFFGEGFVSKVNEDNMVTSYAVVRVELL 619
           L +  + YV +PV R+WV + R    S   Y      G  ++V+E+ +V  Y VV V   
Sbjct: 124 LTQDYMIYVGNPVLREWVKI-RPCTLSLKSYFQTIKFGLATRVDENGVVLGYKVVLVNTR 182

Query: 618 DSPSNYLKLETFLSETAKWVGYMLPSPKPIRL-LKRGAGPIHFNGVLHWF----VYDHGM 454
              +  L L+ + SET +W    +  P PI         PI  NGVLHWF    +   G+
Sbjct: 183 FENATNLTLQIYSSETGEWTCENVCCPCPIPWDSSPYPEPISVNGVLHWFGHGTINAGGI 242

Query: 453 VAFDPYKDPKC----CWIIQLQDNRDVESEYMHEG-------VYRLCDECQGTLRYFEVA 307
           +A D Y         CW I   +    E+ ++ +G         R C   +G + Y  + 
Sbjct: 243 IAIDLYNTSPLRENHCWFIPFPN----ENLFVVDGKKSYKIWCRRACTTSEGFIMYINMV 298

Query: 306 PEGSKLYCFSMW-IMKDYDKGE----WCCEFKVTRSDLNSSDPELSSWLLEATFLPLSFH 142
            E        +W + K+Y + E    W    ++   DL   D  + S       +P+  H
Sbjct: 299 SESK----MKVWRLNKNYYEIESREYWQLSSEI---DLAHVDYGIGS-------IPIVMH 344

Query: 141 PLNLNTVYLRCIELGCIVSYDIQNR 67
           P + N VYL  +E  C+VS +++++
Sbjct: 345 PFDRNVVYLWSVEKSCLVSINMRDQ 369


>ref|XP_002317095.1| predicted protein [Populus trichocarpa] gi|222860160|gb|EEE97707.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 19/261 (7%)
 Frame = -2

Query: 780 YYVCDPVTRQWVTLPRGRGKSPNRYPFFFGEGFVSKVNEDNMVTSYAVVR----VELLDS 613
           YY+C+P TRQW  LP    ++  +  +F   G V + N    +           V  ++ 
Sbjct: 165 YYICNPFTRQWSVLPPPLIRTTTKRIYF---GLVCQPNYQRWIQGQQYESRFRLVRFIEV 221

Query: 612 PSNYLKLETFLSETAKWVGYMLPSPKPIRLLKRGAGPIHFNGVLHWFVYDHGMVAFDPYK 433
             +++ ++ + SET +W    L   +   +       +  +G LHW+     +VA+DP+ 
Sbjct: 222 EEHHVAVDLYCSETGQWNESFLVGAQYDFIF---TNVLAHDGKLHWY-NGRDVVAYDPFN 277

Query: 432 DPKCCWIIQLQDN-----RDVESEYMHEGVYRLCD----ECQGTLRYFEVAPEGSKLYC- 283
           D +  +I   Q        DV        + R+ +    EC+G LR+ ++     +    
Sbjct: 278 DGQTIFIDGSQFKGRTPLPDVILNNPDRLILRVVNFRLGECRGLLRFMQIITNSYRSDSN 337

Query: 282 --FSMWIMKDYDKGEWCCEFKVTRSDLNSSDPELSSWLLEATFL---PLSFHPLNLNTVY 118
              S+W +KD +   +     ++  ++ S +P +  ++     +    L+FHP N N VY
Sbjct: 338 DHLSVWELKDNETRGFSLVHVISFDNMFSKEPWVRDFVKSENRVNARALAFHPENKNVVY 397

Query: 117 LRCIELGCIVSYDIQNRRLDI 55
           L    L  I+S +I+   L++
Sbjct: 398 LGF--LYHIISCNIRTGELEV 416


>ref|NP_175421.2| F-box protein [Arabidopsis thaliana]
           gi|75177431|sp|Q9LPM2.1|FB51_ARATH RecName: Full=F-box
           protein At1g49990 gi|8569100|gb|AAF76445.1|AC015445_12
           Contains Ribosomal S17 PF|00366 and DLH PF|01738 domains
           [Arabidopsis thaliana] gi|52354165|gb|AAU44403.1|
           hypothetical protein AT1G49990 [Arabidopsis thaliana]
           gi|332194383|gb|AEE32504.1| F-box protein [Arabidopsis
           thaliana]
          Length = 430

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
 Frame = -2

Query: 777 YVCDPVTRQWVTLPRG-----RGKSPNRYPFFFGEGFVSKVNEDNMVTSYAVVR---VEL 622
           +V +PV ++WV +P+      + K P     + G G V++V E+ +V+S+ +VR   +EL
Sbjct: 134 FVGNPVLQEWVEIPQPPNPWVQDKHPWYPSPYSGVGMVTRV-ENGVVSSFKMVRTVQMEL 192

Query: 621 LDSPSN--YL-KLETFLSETAKWVGYMLPSPKPIRLLKRGAGPIHFNGVLH-W--FVYDH 460
           +D      YL ++  + SET  W    + S +P+    R   P++ NGVL+ W  +++ +
Sbjct: 193 IDRRDEGMYLWRVCVYSSETGLWTFKQVFSSRPVHG-GRVDSPVNLNGVLYMWDRYMFSN 251

Query: 459 G---MVAFDPYKDPKCCWIIQL---QDNRDVESEYMHEGVYRLCDECQGTLRYFEVAPEG 298
           G   +VA D Y     C +I L    D  + E +  HE V R        + + EV    
Sbjct: 252 GPGVLVAHDFYGADDQCQVIPLPGANDEHEHEHDDEHEHVRRCLTTSGEDVIFIEVIHRI 311

Query: 297 SKLYCFSMWIMKDYDKGEWCCEFKVTRSDLNSSDPELSSWLLEATFLPLSFHPLNLNTVY 118
            K      W + + +   W   ++V           + S++ +    PL+ +P +   VY
Sbjct: 312 LKA-----WRLHNKESERWQLIWEVV----------MPSFISDVNCFPLAMNPFDTYIVY 356

Query: 117 LRCIELGCIVSYDIQ 73
           L   + GC+VS  +Q
Sbjct: 357 LWDRQHGCLVSGYLQ 371


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