BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050561
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   123   2e-26
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     120   1e-25
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   117   1e-24
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]         115   3e-24
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   115   4e-24

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/88 (62%), Positives = 65/88 (73%)
 Frame = -2

Query: 265 LWHNRLGHINKTRITKLQADGILEAFGHEPDVECESCLMGKMTKAPFTGSGERGKDLLDL 86
           LWH RLGHIN+  I KL +DG+L +F +E    CESCL+GKMTKAPFTG  ER  DLL L
Sbjct: 83  LWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPFTGHSERASDLLGL 142

Query: 85  VHTDVCGPFRYCTKGNARYFVTFTDDIS 2
           +HTDVCGP     +GN +YF+TFTDD S
Sbjct: 143 IHTDVCGPMSTSARGNYQYFITFTDDFS 170


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/88 (62%), Positives = 63/88 (71%)
 Frame = -2

Query: 265 LWHNRLGHINKTRITKLQADGILEAFGHEPDVECESCLMGKMTKAPFTGSGERGKDLLDL 86
           +WH RLGHINK R+ KL  DG+L +F  E    CESCL+GKMTKAPFTG  ER  DLL L
Sbjct: 439 IWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLLAL 498

Query: 85  VHTDVCGPFRYCTKGNARYFVTFTDDIS 2
           VHTDVCGP     +G  +YF+TFTDD S
Sbjct: 499 VHTDVCGPMSSTARGGYQYFITFTDDFS 526


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/88 (60%), Positives = 62/88 (70%)
 Frame = -2

Query: 265 LWHNRLGHINKTRITKLQADGILEAFGHEPDVECESCLMGKMTKAPFTGSGERGKDLLDL 86
           +WH RLGHIN+ R+ KL  DG+L +F  E    CESCL+GKMTKAPFTG  ER  +LL L
Sbjct: 383 IWHCRLGHINEKRMKKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSERASELLGL 442

Query: 85  VHTDVCGPFRYCTKGNARYFVTFTDDIS 2
           VHTDVCGP     +G   YF+TFTDD S
Sbjct: 443 VHTDVCGPMSSTARGGFGYFITFTDDFS 470


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/88 (59%), Positives = 61/88 (69%)
 Frame = -2

Query: 265 LWHNRLGHINKTRITKLQADGILEAFGHEPDVECESCLMGKMTKAPFTGSGERGKDLLDL 86
           +WH R GHIN+  + KL  DG+L +FG E    CESCL+GKMTKAPFTG  ER  +LL L
Sbjct: 398 IWHCRFGHINEKCMEKLNRDGLLHSFGFESFETCESCLLGKMTKAPFTGQSERASELLGL 457

Query: 85  VHTDVCGPFRYCTKGNARYFVTFTDDIS 2
           VHTD+CGP     KG   YF+TFTDD S
Sbjct: 458 VHTDICGPMSSTAKGGFGYFITFTDDFS 485


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = -2

Query: 265 LWHNRLGHINKTRITKLQADGILEAFGHEPDVECESCLMGKMTKAPFTGSGERGKDLLDL 86
           +WH RLGHIN+ R+ KL  DG+L +F  E    CESCL+GKMTKAPFTG  +R  +LL L
Sbjct: 531 IWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSKRASELLGL 590

Query: 85  VHTDVCGPFRYCTKGNARYFVTFTDDIS 2
           VHTDVCGP     +G   YF+TFTDD S
Sbjct: 591 VHTDVCGPMSSTARGGFGYFITFTDDFS 618