BLASTX nr result

ID: Atractylodes21_contig00050552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050552
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_002512901.1| pentatricopeptide repeat-containing protein,...   159   2e-37
ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/104 (75%), Positives = 88/104 (84%)
 Frame = -1

Query: 312 KEAYQVLQEMKKEGLGPDISSYNSIMEACCREDLVRPAKRLWDEMFANGCEANLKTYNIL 133
           +EAY VLQEMKK GL PDISSYN +MEACCREDL+RPAKRLWDEMFA+G   NLKTYNIL
Sbjct: 415 REAYGVLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNIL 474

Query: 132 IPKFSEIGQVKEAHRLFCHMLERGLEPDATTYVFLLRGLCQENQ 1
           I KFSEIGQ++EA  LF HMLE+G+ PDATTY  LL GLCQE +
Sbjct: 475 IQKFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKK 518


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/104 (75%), Positives = 88/104 (84%)
 Frame = -1

Query: 312 KEAYQVLQEMKKEGLGPDISSYNSIMEACCREDLVRPAKRLWDEMFANGCEANLKTYNIL 133
           +EAY VLQEMKK GL PDISSYN +MEACCREDL+RPAKRLWDEMFA+G   NLKTYNIL
Sbjct: 415 REAYGVLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNIL 474

Query: 132 IPKFSEIGQVKEAHRLFCHMLERGLEPDATTYVFLLRGLCQENQ 1
           I KFSEIGQ++EA  LF HMLE+G+ PDATTY  LL GLCQE +
Sbjct: 475 IQKFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKK 518


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score =  160 bits (404), Expect = 1e-37
 Identities = 70/104 (67%), Positives = 89/104 (85%)
 Frame = -1

Query: 312 KEAYQVLQEMKKEGLGPDISSYNSIMEACCREDLVRPAKRLWDEMFANGCEANLKTYNIL 133
           +E Y VLQEMKK+G  P+++SYN IMEACC+EDL+RPA++LWDEMF++GC  NLKTYNIL
Sbjct: 411 REGYSVLQEMKKKGFRPNVTSYNYIMEACCKEDLLRPARKLWDEMFSSGCCGNLKTYNIL 470

Query: 132 IPKFSEIGQVKEAHRLFCHMLERGLEPDATTYVFLLRGLCQENQ 1
           I KFSE+GQ +EAH LF HML++G+EPD T+Y  LL GLCQE++
Sbjct: 471 IQKFSEVGQAEEAHMLFYHMLDKGVEPDVTSYTLLLEGLCQEDK 514


>ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547912|gb|EEF49404.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/104 (71%), Positives = 89/104 (85%)
 Frame = -1

Query: 312 KEAYQVLQEMKKEGLGPDISSYNSIMEACCREDLVRPAKRLWDEMFANGCEANLKTYNIL 133
           +EAY VLQEMKK+GLG DIS YN +MEACCREDL+RPAK+LWDEMF  GC  N+KTYNIL
Sbjct: 417 REAYGVLQEMKKKGLGTDISMYNCLMEACCREDLLRPAKKLWDEMFVVGCGVNIKTYNIL 476

Query: 132 IPKFSEIGQVKEAHRLFCHMLERGLEPDATTYVFLLRGLCQENQ 1
           I KFSEI +V+EA RLF HMLE+G+ P+ATTY  +L+GLCQE++
Sbjct: 477 IGKFSEIAEVEEAMRLFHHMLEKGIAPNATTYTSILKGLCQESK 520


>ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/102 (73%), Positives = 87/102 (85%)
 Frame = -1

Query: 312 KEAYQVLQEMKKEGLGPDISSYNSIMEACCREDLVRPAKRLWDEMFANGCEANLKTYNIL 133
           +EAY+VLQEM+K+GL PDIS YNS++E  CREDL+RPAKRLWDEMF  GC  NLKTYNIL
Sbjct: 415 REAYEVLQEMRKKGLDPDISMYNSLIEVLCREDLLRPAKRLWDEMFVIGCGGNLKTYNIL 474

Query: 132 IPKFSEIGQVKEAHRLFCHMLERGLEPDATTYVFLLRGLCQE 7
           I KFSEIGQ++EA RLF HMLE+G+ PDATT+ FLL  LCQE
Sbjct: 475 IGKFSEIGQIEEATRLFNHMLEKGVTPDATTHRFLLEALCQE 516


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