BLASTX nr result

ID: Atractylodes21_contig00050475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050475
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    95   5e-18
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    92   4e-17
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    91   8e-17
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    89   3e-16
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    87   1e-15

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 39/86 (45%), Positives = 67/86 (77%)
 Frame = -1

Query: 287  SVVGFSTPKTMKMEGLIGEQQVVVLVDSGTTHNFISVQLIERLEIPVSPTEGYIISMGAG 108
            SVVG +TP TMK++G IG ++V++LVDSG THNF+S++L+++L +P++ T  Y + MG G
Sbjct: 1049 SVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTG 1108

Query: 107  EAMRGQGVCKGVKVWLQGIWRISGYL 30
             +++G+G+C+GV + +QG+  +  +L
Sbjct: 1109 ISVKGKGICRGVCISMQGLTVVEDFL 1134


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/86 (50%), Positives = 60/86 (69%)
 Frame = -1

Query: 287 SVVGFSTPKTMKMEGLIGEQQVVVLVDSGTTHNFISVQLIERLEIPVSPTEGYIISMGAG 108
           SV+G S+PKT+KMEG I  Q+V+V+VD G THNFIS+  + RL+IP+S +  + +S+G G
Sbjct: 410 SVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVSLGTG 469

Query: 107 EAMRGQGVCKGVKVWLQGIWRISGYL 30
               GQG CK V + LQG+  +  YL
Sbjct: 470 AEAHGQGECKAVPLHLQGVCVMEDYL 495


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 39/78 (50%), Positives = 60/78 (76%)
 Frame = -1

Query: 287 SVVGFSTPKTMKMEGLIGEQQVVVLVDSGTTHNFISVQLIERLEIPVSPTEGYIISMGAG 108
           SV+G S PKTMK+ GLI   +VVV++D G THNF+S++ I++L IPV+ +E + +S+G G
Sbjct: 473 SVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVSLGDG 532

Query: 107 EAMRGQGVCKGVKVWLQG 54
           +A+RG G+C+ V ++L G
Sbjct: 533 QAVRGTGICRAVALYLDG 550


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 38/79 (48%), Positives = 57/79 (72%)
 Frame = -1

Query: 287 SVVGFSTPKTMKMEGLIGEQQVVVLVDSGTTHNFISVQLIERLEIPVSPTEGYIISMGAG 108
           SV+GFS PKT+K+ G I  + V+V++D G THNF+S+  +ERL IPVS  +G+ +S+G G
Sbjct: 368 SVMGFSNPKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVSHAKGFEVSLGTG 427

Query: 107 EAMRGQGVCKGVKVWLQGI 51
           + +RG G C  V + +QG+
Sbjct: 428 QEVRGTGECLAVPLMVQGV 446


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 36/93 (38%), Positives = 64/93 (68%)
 Frame = -1

Query: 287  SVVGFSTPKTMKMEGLIGEQQVVVLVDSGTTHNFISVQLIERLEIPVSPTEGYIISMGAG 108
            SVVG + PKTMK+ G I +++V++L+D G THNFIS ++++ L +P   T  Y + +G+G
Sbjct: 1320 SVVGLTNPKTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSG 1379

Query: 107  EAMRGQGVCKGVKVWLQGIWRISGYLEDFRVSG 9
             A++G+G+C+G+++ L+G W++        + G
Sbjct: 1380 AAVKGKGICEGIELELEG-WKVEANFLPLELGG 1411


Top