BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050428
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629079.1| Structural maintenance of chromosomes protei...    59   5e-07
ref|NP_001174473.1| Os05g0497100 [Oryza sativa Japonica Group] g...    58   7e-07
gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group...    58   7e-07
emb|CAD32690.1| SMC4 protein [Oryza sativa]                            58   7e-07
ref|XP_003568186.1| PREDICTED: structural maintenance of chromos...    56   3e-06

>ref|XP_003629079.1| Structural maintenance of chromosomes protein [Medicago truncatula]
            gi|355523101|gb|AET03555.1| Structural maintenance of
            chromosomes protein [Medicago truncatula]
          Length = 1252

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -1

Query: 87   FLKGVVFSVRPPKKSWKNIANLSGGEKVS 1
            F +GVVFSVRPPKKSWKNIANLSGGEKVS
Sbjct: 1124 FSEGVVFSVRPPKKSWKNIANLSGGEKVS 1152


>ref|NP_001174473.1| Os05g0497100 [Oryza sativa Japonica Group]
           gi|255676463|dbj|BAH93201.1| Os05g0497100 [Oryza sativa
           Japonica Group]
          Length = 421

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
 Frame = -1

Query: 204 DKLSYDYSFFMN*QFD*LMATYSMIFL------QMITLCNCF-------IRSFLKGVVFS 64
           D L   Y      + D  MA +++I L      QMITL           +  F +GVVFS
Sbjct: 250 DDLKKQYDALRKRRLDEFMAGFNIISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 309

Query: 63  VRPPKKSWKNIANLSGGEK 7
           VRPPKKSWKNIANLSGGEK
Sbjct: 310 VRPPKKSWKNIANLSGGEK 328


>gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group]
            gi|218197032|gb|EEC79459.1| hypothetical protein
            OsI_20467 [Oryza sativa Indica Group]
            gi|222632094|gb|EEE64226.1| hypothetical protein
            OsJ_19059 [Oryza sativa Japonica Group]
          Length = 1241

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
 Frame = -1

Query: 204  DKLSYDYSFFMN*QFD*LMATYSMIFL------QMITLCNCF-------IRSFLKGVVFS 64
            D L   Y      + D  MA +++I L      QMITL           +  F +GVVFS
Sbjct: 1070 DDLKKQYDALRKRRLDEFMAGFNIISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 1129

Query: 63   VRPPKKSWKNIANLSGGEK 7
            VRPPKKSWKNIANLSGGEK
Sbjct: 1130 VRPPKKSWKNIANLSGGEK 1148


>emb|CAD32690.1| SMC4 protein [Oryza sativa]
          Length = 1236

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
 Frame = -1

Query: 204  DKLSYDYSFFMN*QFD*LMATYSMIFL------QMITLCNCF-------IRSFLKGVVFS 64
            D L   Y      + D  MA +++I L      QMITL           +  F +GVVFS
Sbjct: 1065 DDLKKQYDALRKRRLDEFMAGFNIISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 1124

Query: 63   VRPPKKSWKNIANLSGGEK 7
            VRPPKKSWKNIANLSGGEK
Sbjct: 1125 VRPPKKSWKNIANLSGGEK 1143


>ref|XP_003568186.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Brachypodium distachyon]
          Length = 1243

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
 Frame = -1

Query: 204  DKLSYDYSFFMN*QFD*LMATYSMIFL------QMITLCNCF-------IRSFLKGVVFS 64
            D L   Y      + D  MA +++I L      QMITL           +  F +GVVFS
Sbjct: 1072 DDLKKLYDGLRKRRLDEFMAGFNIISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 1131

Query: 63   VRPPKKSWKNIANLSGGEK 7
            VRPPKKSWKNIANLSGGEK
Sbjct: 1132 VRPPKKSWKNIANLSGGEK 1150