BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050381
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX99503.1| RNA polymerase beta subunit-2 (chloroplast) [Chry...   142   2e-32
ref|YP_004465176.1| RNA polymerase beta' subunit [Jacobaea vulga...   142   2e-32
gb|ABD93761.1| RNA polymerase beta chain [Helianthus annuus]          142   4e-32
ref|YP_588106.1| RNA polymerase beta'' subunit [Helianthus annuu...   142   4e-32
ref|YP_007353755.1| RNA polymerase beta subunit-2 (chloroplast) ...   141   5e-32

>gb|AEX99503.1| RNA polymerase beta subunit-2 (chloroplast) [Chrysanthemum indicum]
          Length = 1383

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/76 (94%), Positives = 73/76 (96%)
 Frame = +1

Query: 76   DPILEIWDTSIQLVRTCLVLNWDQDKKSSSIEKACASFVEIRTNGLIRDFLRIDLAKSPI 255
            DPILEIWDT+IQLVRTCLVLNWDQDKK   IEKACASFVEIRTNGLIRDFLRIDLAKSPI
Sbjct: 820  DPILEIWDTNIQLVRTCLVLNWDQDKK---IEKACASFVEIRTNGLIRDFLRIDLAKSPI 876

Query: 256  SYTGKRNDLSGSGLIS 303
            SYTGKRNDLSGSGLIS
Sbjct: 877  SYTGKRNDLSGSGLIS 892


>ref|YP_004465176.1| RNA polymerase beta' subunit [Jacobaea vulgaris]
            gi|308156071|gb|ADO15399.1| RNA polymerase beta' subunit
            [Jacobaea vulgaris]
          Length = 1380

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/76 (94%), Positives = 73/76 (96%)
 Frame = +1

Query: 76   DPILEIWDTSIQLVRTCLVLNWDQDKKSSSIEKACASFVEIRTNGLIRDFLRIDLAKSPI 255
            DPILEIWDTSIQLVRTCLVLNWDQDKK   IEKACASFVEIRTNGLIRDFLRIDLAKSPI
Sbjct: 817  DPILEIWDTSIQLVRTCLVLNWDQDKK---IEKACASFVEIRTNGLIRDFLRIDLAKSPI 873

Query: 256  SYTGKRNDLSGSGLIS 303
            SYTGKRNDLSG+GLIS
Sbjct: 874  SYTGKRNDLSGAGLIS 889


>gb|ABD93761.1| RNA polymerase beta chain [Helianthus annuus]
          Length = 861

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = +1

Query: 76  DPILEIWDTSIQLVRTCLVLNWDQDKKSSSIEKACASFVEIRTNGLIRDFLRIDLAKSPI 255
           DPILEIWDTSIQLVRTCLVLNWDQDKK   IEKACASFVEIRTNGLIRDFLRIDLAKSPI
Sbjct: 371 DPILEIWDTSIQLVRTCLVLNWDQDKK---IEKACASFVEIRTNGLIRDFLRIDLAKSPI 427

Query: 256 SYTGKRNDLSGSGLIS 303
           SYTGKRNDL GSGLIS
Sbjct: 428 SYTGKRNDLPGSGLIS 443


>ref|YP_588106.1| RNA polymerase beta'' subunit [Helianthus annuus]
            gi|122179584|sp|Q1KXX0.1|RPOC2_HELAN RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            gi|88656884|gb|ABD47135.1| RNA polymerase beta subunit
            [Helianthus annuus]
          Length = 1362

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = +1

Query: 76   DPILEIWDTSIQLVRTCLVLNWDQDKKSSSIEKACASFVEIRTNGLIRDFLRIDLAKSPI 255
            DPILEIWDTSIQLVRTCLVLNWDQDKK   IEKACASFVEIRTNGLIRDFLRIDLAKSPI
Sbjct: 820  DPILEIWDTSIQLVRTCLVLNWDQDKK---IEKACASFVEIRTNGLIRDFLRIDLAKSPI 876

Query: 256  SYTGKRNDLSGSGLIS 303
            SYTGKRNDL GSGLIS
Sbjct: 877  SYTGKRNDLPGSGLIS 892


>ref|YP_007353755.1| RNA polymerase beta subunit-2 (chloroplast) [Chrysanthemum x
            morifolium] gi|375298824|gb|AFA45263.1| RNA polymerase
            beta subunit-2 (chloroplast) [Chrysanthemum x morifolium]
          Length = 1383

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/76 (93%), Positives = 73/76 (96%)
 Frame = +1

Query: 76   DPILEIWDTSIQLVRTCLVLNWDQDKKSSSIEKACASFVEIRTNGLIRDFLRIDLAKSPI 255
            DPILEIWDT+IQLVRTCLVLNWDQDKK   IEKACASFVEIRTNGLIRDFLRIDLAKSPI
Sbjct: 820  DPILEIWDTNIQLVRTCLVLNWDQDKK---IEKACASFVEIRTNGLIRDFLRIDLAKSPI 876

Query: 256  SYTGKRNDLSGSGLIS 303
            +YTGKRNDLSGSGLIS
Sbjct: 877  AYTGKRNDLSGSGLIS 892