BLASTX nr result

ID: Atractylodes21_contig00050328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050328
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
emb|CBI36552.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
ref|XP_003610281.1| Pentatricopeptide repeat-containing protein ...    75   6e-12
ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +1

Query: 4   TKFVSKITERVIVVRDANRFHHFKDGRCSCGDYW 105
           TKF+SKITERVIVVRDANRFHHFKDG CSCGDYW
Sbjct: 745 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778


>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +1

Query: 4   TKFVSKITERVIVVRDANRFHHFKDGRCSCGDYW 105
           TKF+SKITERVIVVRDANRFHHFKDG CSCGDYW
Sbjct: 693 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726


>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +1

Query: 4   TKFVSKITERVIVVRDANRFHHFKDGRCSCGDYW 105
           TKF+SKITERVIVVRDANRFHHFKDG CSCGDYW
Sbjct: 748 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781


>ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511336|gb|AES92478.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 783

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +1

Query: 4   TKFVSKITERVIVVRDANRFHHFKDGRCSCGDYW 105
           TKF+SKITERVIVVRDANRFHHFKDG CSCGDYW
Sbjct: 750 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783


>ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|222855335|gb|EEE92882.1|
           predicted protein [Populus trichocarpa]
          Length = 605

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +1

Query: 1   FTKFVSKITERVIVVRDANRFHHFKDGRCSCGDYW 105
           +TKF+SKIT+RVIVVRDANRFHHFKDG CSCGDYW
Sbjct: 571 WTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605


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