BLASTX nr result

ID: Atractylodes21_contig00050279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050279
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   136   2e-30
ref|XP_003522745.1| PREDICTED: rhamnogalacturonate lyase B-like ...   135   5e-30
ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...   133   2e-29
ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28

>ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|222842839|gb|EEE80386.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/96 (63%), Positives = 81/96 (84%)
 Frame = +3

Query: 3   MVQITLSNPEGHLTGIQYNGIDNLLEVINEETNRGYWDVVWNPSGSTKKKGPLDRLAGTS 182
           ++Q+TLSNP GH+TGIQYNG++NLLE  N E++RGYWDVVW+  G T+KKG LDRL GT+
Sbjct: 65  ILQVTLSNPGGHVTGIQYNGLENLLETDNGESDRGYWDVVWSGEGVTRKKGNLDRLDGTN 124

Query: 183 CEVIVETEDQVELSFSRTWNSSVEDKIVPLKIDKRY 290
             V+VE+E++VE+SF+R WNSS++ K+VPL  DKRY
Sbjct: 125 LTVVVESEEKVEISFTRMWNSSLQAKVVPLNFDKRY 160


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/96 (64%), Positives = 81/96 (84%)
 Frame = +3

Query: 3   MVQITLSNPEGHLTGIQYNGIDNLLEVINEETNRGYWDVVWNPSGSTKKKGPLDRLAGTS 182
           ++Q+TLSNPEG +TGIQYNGI NLLEV+N+E+NRGYWD+VW+  GST   G  D + GTS
Sbjct: 21  ILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLVWSTPGSTGTTGIFDVIKGTS 80

Query: 183 CEVIVETEDQVELSFSRTWNSSVEDKIVPLKIDKRY 290
            +VIVETE+QVELSF+R+W+ S+E K++PL IDKR+
Sbjct: 81  FKVIVETEEQVELSFTRSWDPSLEGKLIPLNIDKRF 116


>ref|XP_003522745.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/102 (64%), Positives = 81/102 (79%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   MVQITLSNPEGHLTGIQYNGIDNLLEVINEETNRGYWDVVWNPSGS--TKK----KGPLD 164
           +VQ+ LSNPEG +TGIQYNGIDNLLEV+N+E+NRGYWD+VW+  G   TKK    KG  D
Sbjct: 21  IVQVNLSNPEGIVTGIQYNGIDNLLEVLNDESNRGYWDIVWDEGGKKRTKKGAKGKGRFD 80

Query: 165 RLAGTSCEVIVETEDQVELSFSRTWNSSVEDKIVPLKIDKRY 290
           R+  T+  VIVE+E+QVELSFSRTWN S+E K+ PL IDKR+
Sbjct: 81  RMEATNFTVIVESEEQVELSFSRTWNDSLEGKLPPLNIDKRF 122


>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/96 (63%), Positives = 79/96 (82%)
 Frame = +3

Query: 3   MVQITLSNPEGHLTGIQYNGIDNLLEVINEETNRGYWDVVWNPSGSTKKKGPLDRLAGTS 182
           M+++TLSNPEG +TGIQYN IDNLLEV+N+E+NRGYWD+VW+   ST   G  D + GT+
Sbjct: 21  MLKVTLSNPEGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSPTSTGTSGTFDVIKGTT 80

Query: 183 CEVIVETEDQVELSFSRTWNSSVEDKIVPLKIDKRY 290
            +V+VE EDQVELSF+RTW+ S+E K+VPL IDKR+
Sbjct: 81  FKVMVENEDQVELSFTRTWDVSLEGKLVPLNIDKRF 116


>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  129 bits (324), Expect = 3e-28
 Identities = 61/96 (63%), Positives = 81/96 (84%)
 Frame = +3

Query: 3   MVQITLSNPEGHLTGIQYNGIDNLLEVINEETNRGYWDVVWNPSGSTKKKGPLDRLAGTS 182
           ++Q+TLSNP+G +TGI+Y+GIDNLLEV N+E+NRGYWD+VWN +G+T   G  D + G S
Sbjct: 5   ILQVTLSNPDGIVTGIRYSGIDNLLEVQNDESNRGYWDLVWNTAGTT---GIFDVIKGRS 61

Query: 183 CEVIVETEDQVELSFSRTWNSSVEDKIVPLKIDKRY 290
            +VIVETE+QVE+SF+RTW+SS E K+VPL IDKR+
Sbjct: 62  FKVIVETEEQVEVSFTRTWDSSQEGKLVPLNIDKRF 97


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