BLASTX nr result

ID: Atractylodes21_contig00050267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050267
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    69   3e-10
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    69   3e-10
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    69   5e-10
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    57   2e-06
ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208...    55   8e-06

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = -1

Query: 230 PLVTKPAVGVLGPSTGKEFRRLTDKELQQKRERGLCYRCDEKWNIGHRCR*RKLSVLL 57
           P  TK  + +  P    E RRL++KELQ KRERGLC+RCD+KW++GHRC+ ++LSVLL
Sbjct: 275 PAKTKTHIPIARPYG--EIRRLSEKELQHKRERGLCFRCDDKWSVGHRCK-KELSVLL 329


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -1

Query: 179 EFRRLTDKELQQKRERGLCYRCDEKWNIGHRCR*RKLSVLL 57
           E RRL++KELQ KRE GLC+RCDEKW IGHRC+ ++LS+LL
Sbjct: 333 EIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILL 373


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 27/42 (64%), Positives = 37/42 (88%)
 Frame = -1

Query: 179 EFRRLTDKELQQKRERGLCYRCDEKWNIGHRCR*RKLSVLLI 54
           E RRLT+KELQ+KR +GLC++CDEKW +GH+CR ++LSVL +
Sbjct: 399 EMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFM 440


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/40 (55%), Positives = 36/40 (90%)
 Frame = -1

Query: 173 RRLTDKELQQKRERGLCYRCDEKWNIGHRCR*RKLSVLLI 54
           +RLT+ ELQ +RE+G+C++CDEK+++GHRC+ ++L VLL+
Sbjct: 179 KRLTESELQARREKGICFKCDEKFSLGHRCK-KELRVLLV 217


>ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
          Length = 1969

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = -1

Query: 176 FRRLTDKELQQKRERGLCYRCDEKWNIGHRCR*RKLSVLLI 54
           FRR TD ELQ +R++ LCYRCDE ++ GHRC+ ++L + L+
Sbjct: 857 FRRWTDSELQARRDKDLCYRCDEPFSEGHRCKNKELRLYLV 897


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