BLASTX nr result

ID: Atractylodes21_contig00050261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050261
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264491.2| PREDICTED: probable serine/threonine-protein...    59   5e-07
ref|XP_002526426.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002264491.2| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Vitis vinifera] gi|297739502|emb|CBI29684.3| unnamed
           protein product [Vitis vinifera]
          Length = 741

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/68 (50%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
 Frame = +3

Query: 42  MGCICSKGISTNEYSEKE------SKRSLKPFIGSSRRDEVAVGVDNGGNEATTRLISEG 203
           MGCICSKG S NEY EK       SK+S K  + SSRR+ V V    G N+AT RLI   
Sbjct: 1   MGCICSKGSSVNEYVEKNARDKELSKKSSKRLVASSRREGVVVEGYGGSNDATARLIPTQ 60

Query: 204 NGETAASS 227
           + E  A+S
Sbjct: 61  SAEDNAAS 68


>ref|XP_002526426.1| conserved hypothetical protein [Ricinus communis]
           gi|223534206|gb|EEF35921.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
 Frame = +3

Query: 42  MGCICSKGISTNEY-----SEKESKRSLKPFIGSSRRDEVAVGVDNGGNEATTRLIS--- 197
           MGCICSKG   NEY     + KE+ +S K  + SS+RDE     D  GN+AT  LIS   
Sbjct: 1   MGCICSKGTRANEYVQNNGTSKETTKSGKHSVSSSKRDEAIAQADGSGNDATASLISNQP 60

Query: 198 --EGNGETAASS 227
                G T+ SS
Sbjct: 61  RNNNGGSTSVSS 72


Top