BLASTX nr result

ID: Atractylodes21_contig00050240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050240
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                83   2e-14
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    82   6e-14
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          79   4e-13
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas...    78   8e-13
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    76   2e-12

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/61 (62%), Positives = 46/61 (75%)
 Frame = -2

Query: 184 EAGCIVVDNIFQFHLKSTKMPEEWRCSVVVPLYKNKGDTQSYGNYRGIKLLSHTMKLWER 5
           E G   + ++F   LK+ KMP EWR S +VP+YKNKGD Q+  NYRGIKL+SHTMKLWER
Sbjct: 593 ETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWER 652

Query: 4   V 2
           V
Sbjct: 653 V 653


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/61 (62%), Positives = 46/61 (75%)
 Frame = -2

Query: 184 EAGCIVVDNIFQFHLKSTKMPEEWRCSVVVPLYKNKGDTQSYGNYRGIKLLSHTMKLWER 5
           E G   + ++F   LK+ KMP EWR S +VP+YKNKGD Q+  NYRGIKL+SHTMKLWER
Sbjct: 197 ETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWER 256

Query: 4   V 2
           V
Sbjct: 257 V 257


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -2

Query: 157 IFQFHLKSTKMPEEWRCSVVVPLYKNKGDTQSYGNYRGIKLLSHTMKLWERV 2
           +F   L+S KMP EWR S +VP+YKNKGD QS  NYRGIKL++HTMKLWERV
Sbjct: 96  LFNEILRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWERV 147


>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 243

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/61 (55%), Positives = 45/61 (73%)
 Frame = -2

Query: 184 EAGCIVVDNIFQFHLKSTKMPEEWRCSVVVPLYKNKGDTQSYGNYRGIKLLSHTMKLWER 5
           + G + +  +F   +K+ KM +EWR S ++P+YKNKGD Q   NYRGIKL+SHTMKLWER
Sbjct: 50  DRGIVWLTKLFNEIMKTKKMLDEWRRSTLIPIYKNKGDIQHCANYRGIKLMSHTMKLWER 109

Query: 4   V 2
           V
Sbjct: 110 V 110


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -2

Query: 184 EAGCIVVDNIFQFHLKSTKMPEEWRCSVVVPLYKNKGDTQSYGNYRGIKLLSHTMKLWER 5
           + G + + N+F   +++ KM +EWR S ++P+ KNKGD Q+  NYRGIKL+SHTMKLWER
Sbjct: 175 DRGTVWLANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWER 234

Query: 4   V 2
           V
Sbjct: 235 V 235


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